Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M18
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337...    27   1.9  

>05_03_0359 -
           12929240-12929376,12931379-12933497,12933594-12933773,
           12933905-12934118,12934199-12934551,12934642-12934864,
           12934953-12935230,12935456-12935725,12935817-12935939,
           12936025-12936102,12936351-12936527,12936597-12936686,
           12937010-12937120,12937397-12937585,12937667-12937858,
           12937990-12938076,12938153-12938257,12938340-12938396,
           12938471-12938545,12938647-12938763,12938876-12939000,
           12939082-12939121,12939241-12939291,12939382-12939569,
           12939808-12939901,12939976-12940149,12940242-12940337,
           12940597-12940689,12940794-12940955,12941034-12941240,
           12941356-12941728,12942379-12942436,12943096-12943171,
           12943874-12943941,12944321-12944642
          Length = 2433

 Score = 26.6 bits (56), Expect(2) = 1.9
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -1

Query: 466 PPXXXXXXFFFFFFFF 419
           PP      FFFFFFFF
Sbjct: 51  PPRVAFSAFFFFFFFF 66



 Score = 22.2 bits (45), Expect(2) = 1.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 442 FFFFFFFFXG 413
           FFFFFFF  G
Sbjct: 60  FFFFFFFSEG 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,470,254
Number of Sequences: 37544
Number of extensions: 57851
Number of successful extensions: 350
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)