Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M17
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   1.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.4  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -2

Query: 423 ICLRIFHQINILICVVPTRNKHTRRFWIFFQSLYFITYFFEI 298
           ICL  F  +   I V P  +     F  ++  LYF    F I
Sbjct: 303 ICLLPFRALTFWIIVAPAGSNFEIGFENYYNILYFSRIMFHI 344


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 339 FFQSLYFITYFFEIFCFNIGIILI 268
           F+ +LYF+T  F  F   + I+LI
Sbjct: 232 FWSALYFLTIIFLFFIIPLIILLI 255


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 581 YCSVLEQRLAVNLNLVGRHYTLHVIGIIIIL 673
           +C++   ++    N V R Y  + IG+II +
Sbjct: 22  FCAICVPKITSTNNEVPRWYICYTIGVIITI 52


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 580 KILHPNDLNKQLDVVECNHRSLLNEQALVW 491
           KI H  +L+K L  V  +H SL +   L+W
Sbjct: 229 KIKHLVNLHKNLVKVAKDHNSLYSLHLLLW 258


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 451  LQPIIHDQSDLLADLSPNQHPDLRRP 374
            +Q  + D +  +  L   Q+PDLR P
Sbjct: 1105 IQESLRDLNRKIESLEKMQYPDLRSP 1130


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 451  LQPIIHDQSDLLADLSPNQHPDLRRP 374
            +Q  + D +  +  L   Q+PDLR P
Sbjct: 1105 IQESLRDLNRKIESLEKMQYPDLRSP 1130


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 316 HLFL*NILLQHRNHPH 269
           HL +   LL  +NHPH
Sbjct: 77  HLRIYQTLLSGKNHPH 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,205
Number of Sequences: 336
Number of extensions: 3775
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)