Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M17
         (859 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    38   3e-04
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          33   0.015

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = +1

Query: 433 HVLWAA-EHNKLDTLRELLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGA 600
           H L++A EH  L+  R +L +    V+S +SDG TPL  A  SN+     +LL  GA
Sbjct: 429 HALFSAVEHGHLEKARTILESTDVDVNSLNSDGLTPLDVAVLSNNRSMTKMLLQQGA 485


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 32.7 bits (71), Expect = 0.015
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +1

Query: 505 VHSRDSDGYTPLHRAAYSNHLDAIS-LLLSFGAKVSSKSELGWTPLHSACNWNNYHI 672
           +H  D  G TPLHRA   N  D +  LLL  G ++   ++ G T L +A    N  I
Sbjct: 810 LHYCDYRGNTPLHRAVVENVPDMVRLLLLQGGLRLDCTNDDGLTALQAAVYARNLKI 866



 Score = 27.1 bits (57), Expect = 0.73
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +1

Query: 532 TPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSA 648
           T LH A   N    +  LL  GAK+      G TPLH A
Sbjct: 786 TGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRA 824


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,359
Number of Sequences: 2352
Number of extensions: 15142
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)