Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_M14
(869 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 107 3e-22
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 97 4e-19
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 67 6e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 53 8e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 45 0.003
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 44 0.005
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.027
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.047
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.082
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.4
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 107 bits (258), Expect = 3e-22
Identities = 48/59 (81%), Positives = 48/59 (81%)
Frame = +1
Query: 616 RRFPLEAPSCALLFRPCRLXDTCPPFSLREAXXXXIAHAVGISVRCXSXAPXWXVCXTP 792
RRFPLEAPSCALLFRPCRL DTCPPFSLREA IAHAVGISVRC S AP W VC P
Sbjct: 46 RRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
Score = 74.5 bits (175), Expect = 3e-12
Identities = 52/124 (41%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Frame = +2
Query: 485 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTGVSPWKLPRALSCSDP 664
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDT P + P P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 665 AAYXIPVRLSPFG--KLWXFX*L-TL*VSQXGVXRXLQXGXCAXPPVXPDRXXLSGXXXL 835
+P PF + W F + +S C PP P L
Sbjct: 62 C--RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVL 119
Query: 836 SPXR 847
SP R
Sbjct: 120 SPTR 123
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 97.5 bits (232), Expect = 4e-19
Identities = 64/134 (47%), Positives = 74/134 (55%)
Frame = +2
Query: 317 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 496
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 497 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTGVSPWKLPRALSCSDPAAYX 676
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD P P P +
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP--FG 131
Query: 677 IPVRLSPFGKLWXF 718
+PV +G+ + F
Sbjct: 132 LPVSFRCYGRGFSF 145
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 66.9 bits (156), Expect = 6e-10
Identities = 33/46 (71%), Positives = 35/46 (76%)
Frame = +2
Query: 503 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTGVSPWKLP 640
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDT P P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 616 RRFPLEAPSCALLFRP 663
RRFPL APSCALLF P
Sbjct: 82 RRFPLAAPSCALLFLP 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 493 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 380
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 293 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 460
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 53.2 bits (122), Expect = 8e-06
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +3
Query: 642 VRSPVPTLPLTGYLSAFLPXXXXXXXXXXRCRYLSXV 752
+RSPVPTLPLTGYLSAFLP RCRYLS V
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 96 DPDMIRYIDEFGQTTTRMQ 152
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = +2
Query: 578 VRGGETRQDYKDTGVSPWKLPRALSCSDPAAYXIPV 685
VR GETRQD K VS LP ALSCS+PA IPV
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPV 58
Score = 33.9 bits (74), Expect = 5.4
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 685 PPFSLREAXXXXIAHAVGISVRCXSXAPXWXVCXTP 792
PPFSL + + GIS RC S AP W V P
Sbjct: 59 PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNP 94
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 412 HSKAVIRLSTESGDNAGKNM 471
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 44.0 bits (99), Expect = 0.005
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -3
Query: 792 GGXAHXPXWSXRXTPX*DTYSVSYXXXXSFPKGERRTGI-X*AAGSEQESARGSFQGETP 616
G A+ P WS R P DT SVSY FPKG++ + G + + G+ ++P
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
Query: 615 VSL*SCRVSPPLT 577
SL PPLT
Sbjct: 87 ASLSPVGFRPPLT 99
Score = 44.0 bits (99), Expect = 0.005
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = -1
Query: 695 EKGGQVSXKRQGRNRRAHEGASRGKRLYLYSPVG 594
+K QVS KRQGRNRRAHEGA+ K SPVG
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVG 93
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 41.5 bits (93), Expect = 0.027
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 392 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 565
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 566 IDAQVRGGETRQDYKDTGVSPWKLP 640
I Q + +T+ +YK T P + P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSP 106
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.047
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 291 SALMNRPTRGERRFAYW 341
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 363 ERGSGRAPNTQTASPRALADSLMQ 292
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.4
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 502 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 380
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 174 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 341
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 254 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 90
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,439,955
Number of Sequences: 1657284
Number of extensions: 13693810
Number of successful extensions: 36307
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 34925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36298
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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