Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M13
         (903 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D63B92 Cluster: UPI0000D63B92 related cluster; n...    37   0.81 
UniRef50_Q9H4Q3 Cluster: PR domain zinc finger protein 13; n=13;...    36   1.1  

>UniRef50_UPI0000D63B92 Cluster: UPI0000D63B92 related cluster; n=1;
           Mus musculus|Rep: UPI0000D63B92 UniRef100 entry - Mus
           musculus
          Length = 666

 Score = 36.7 bits (81), Expect = 0.81
 Identities = 23/73 (31%), Positives = 35/73 (47%)
 Frame = +2

Query: 35  LKILIASRPFG*DQSVVSCSFQLNILKVPSLRDQYIKLIFVKRRDVRGSLHSRHGSARHC 214
           LK  +  RPFG D S ++   +L+       R ++   + V+RRD+   + SRH      
Sbjct: 560 LKCKVCLRPFG-DPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLM 618

Query: 215 SAAGIGPQKSPYY 253
           + AG GP   P Y
Sbjct: 619 AKAGDGPGPEPSY 631


>UniRef50_Q9H4Q3 Cluster: PR domain zinc finger protein 13; n=13;
           Eumetazoa|Rep: PR domain zinc finger protein 13 - Homo
           sapiens (Human)
          Length = 717

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 23/73 (31%), Positives = 35/73 (47%)
 Frame = +2

Query: 35  LKILIASRPFG*DQSVVSCSFQLNILKVPSLRDQYIKLIFVKRRDVRGSLHSRHGSARHC 214
           LK  +  RPFG D S ++   +L+       R ++   + V+RRD+   + SRH      
Sbjct: 611 LKCKVCLRPFG-DPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLL 669

Query: 215 SAAGIGPQKSPYY 253
           + AG GP   P Y
Sbjct: 670 AKAGDGPGAEPGY 682


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,699,307
Number of Sequences: 1657284
Number of extensions: 10363632
Number of successful extensions: 19151
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19148
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)