Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M13
         (903 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145665-1|AAD38640.1|  213|Drosophila melanogaster BcDNA.GH1111...    30   3.8  
AE014296-400|AAF47601.1|  213|Drosophila melanogaster CG1927-PA ...    30   3.8  
BT011114-1|AAR82781.1|  535|Drosophila melanogaster LD17675p pro...    29   6.6  
AY051747-1|AAK93171.1| 1163|Drosophila melanogaster LD27520p pro...    29   6.6  
AE014296-1762|AAN11935.1| 1163|Drosophila melanogaster CG6721-PB...    29   6.6  
AE014296-1761|AAF50196.1| 1163|Drosophila melanogaster CG6721-PA...    29   6.6  

>AF145665-1|AAD38640.1|  213|Drosophila melanogaster BcDNA.GH11112
           protein.
          Length = 213

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -2

Query: 383 VMSYHITLRSEFLRKSSMYF*SEMTCILYSQFCSMLRLAITSYYNMV 243
           +MS+H   R+    + S+YF S +  +L SQFC++ R    S YN +
Sbjct: 146 MMSHH---RNGLTMQKSLYFRSPLN-VLSSQFCAICRTETDSKYNRI 188


>AE014296-400|AAF47601.1|  213|Drosophila melanogaster CG1927-PA
           protein.
          Length = 213

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = -2

Query: 383 VMSYHITLRSEFLRKSSMYF*SEMTCILYSQFCSMLRLAITSYYNMV 243
           +MS+H   R+    + S+YF S +  +L SQFC++ R    S YN +
Sbjct: 146 MMSHH---RNGLTMQKSLYFRSPLN-VLSSQFCAICRTETDSKYNRI 188


>BT011114-1|AAR82781.1|  535|Drosophila melanogaster LD17675p
           protein.
          Length = 535

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 27/104 (25%), Positives = 48/104 (46%)
 Frame = -2

Query: 344 RKSSMYF*SEMTCILYSQFCSMLRLAITSYYNMVISEGRSRRHCNAGPTRDGSGASPEHP 165
           R S      E T  LY +FC+   +    ++  VIS   +  H ++      + A+P  P
Sbjct: 75  RSSQQTCKEEFTVELYKKFCTEQHVDAVKHFLEVIS---TPSHASSSVHPAAAAATPLEP 131

Query: 164 VVLQKSV*YTGPSMRELSRY*AEKNKILHFDLSQKAEKRSKS*G 33
           V+L++ +    P+ R+  R+   + K  HF L+  +   +KS G
Sbjct: 132 VLLKEGLMTKYPTSRK--RF-GRQFKQRHFRLTTHSLSYAKSKG 172


>AY051747-1|AAK93171.1| 1163|Drosophila melanogaster LD27520p
           protein.
          Length = 1163

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 27/104 (25%), Positives = 48/104 (46%)
 Frame = -2

Query: 344 RKSSMYF*SEMTCILYSQFCSMLRLAITSYYNMVISEGRSRRHCNAGPTRDGSGASPEHP 165
           R S      E T  LY +FC+   +    ++  VIS   +  H ++      + A+P  P
Sbjct: 703 RSSQQTCKEEFTVELYKKFCTEQHVDAVKHFLEVIS---TPSHASSSVHPAAAAATPLEP 759

Query: 164 VVLQKSV*YTGPSMRELSRY*AEKNKILHFDLSQKAEKRSKS*G 33
           V+L++ +    P+ R+  R+   + K  HF L+  +   +KS G
Sbjct: 760 VLLKEGLMTKYPTSRK--RF-GRQFKQRHFRLTTHSLSYAKSKG 800


>AE014296-1762|AAN11935.1| 1163|Drosophila melanogaster CG6721-PB,
           isoform B protein.
          Length = 1163

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 27/104 (25%), Positives = 48/104 (46%)
 Frame = -2

Query: 344 RKSSMYF*SEMTCILYSQFCSMLRLAITSYYNMVISEGRSRRHCNAGPTRDGSGASPEHP 165
           R S      E T  LY +FC+   +    ++  VIS   +  H ++      + A+P  P
Sbjct: 703 RSSQQTCKEEFTVELYKKFCTEQHVDAVKHFLEVIS---TPSHASSSVHPAAAAATPLEP 759

Query: 164 VVLQKSV*YTGPSMRELSRY*AEKNKILHFDLSQKAEKRSKS*G 33
           V+L++ +    P+ R+  R+   + K  HF L+  +   +KS G
Sbjct: 760 VLLKEGLMTKYPTSRK--RF-GRQFKQRHFRLTTHSLSYAKSKG 800


>AE014296-1761|AAF50196.1| 1163|Drosophila melanogaster CG6721-PA,
           isoform A protein.
          Length = 1163

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 27/104 (25%), Positives = 48/104 (46%)
 Frame = -2

Query: 344 RKSSMYF*SEMTCILYSQFCSMLRLAITSYYNMVISEGRSRRHCNAGPTRDGSGASPEHP 165
           R S      E T  LY +FC+   +    ++  VIS   +  H ++      + A+P  P
Sbjct: 703 RSSQQTCKEEFTVELYKKFCTEQHVDAVKHFLEVIS---TPSHASSSVHPAAAAATPLEP 759

Query: 164 VVLQKSV*YTGPSMRELSRY*AEKNKILHFDLSQKAEKRSKS*G 33
           V+L++ +    P+ R+  R+   + K  HF L+  +   +KS G
Sbjct: 760 VLLKEGLMTKYPTSRK--RF-GRQFKQRHFRLTTHSLSYAKSKG 800


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,830,134
Number of Sequences: 53049
Number of extensions: 507377
Number of successful extensions: 934
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)