Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M10
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1584|AAN11985.1|  286|Drosophila melanogaster CG32032-P...    30   3.7  
AY122062-1|AAM52574.1|  372|Drosophila melanogaster AT01736p pro...    29   8.6  

>AE014296-1584|AAN11985.1|  286|Drosophila melanogaster CG32032-PA
           protein.
          Length = 286

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +3

Query: 333 TSFYIITITRNR--LRLDPVRKILSCIFVIFFFKLDILKLNTCVSQIGYVIFYMSFLL*I 506
           +S Y + +TRNR  L LD +R I + +     +   I K+     ++G  +F +  LL +
Sbjct: 218 SSIYTVVLTRNRLGLSLDELRSIRNLLSRRGLYTETIRKVCNGCGRLGGSLFALLALLLV 277

Query: 507 IRIAY 521
           +R+A+
Sbjct: 278 VRLAW 282


>AY122062-1|AAM52574.1|  372|Drosophila melanogaster AT01736p
           protein.
          Length = 372

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 378 DPVRKILSCIFVIFFFKLDILKLNTCVSQI 467
           DP+ + L C++V F F+   LKL+ C + I
Sbjct: 221 DPITEFLECLYVNFDFEAARLKLHECQTVI 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,090,996
Number of Sequences: 53049
Number of extensions: 381587
Number of successful extensions: 484
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)