Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M06
         (939 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    69   1e-10
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    52   2e-05
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    51   4e-05
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    38   0.37 
UniRef50_Q9KXZ1 Cluster: Putative secreted protein; n=2; Strepto...    34   4.5  

>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 69.3 bits (162), Expect = 1e-10
 Identities = 48/122 (39%), Positives = 57/122 (46%)
 Frame = +3

Query: 378 RGEAVCVLGALPLPRXLTRCARSFGCGERYQLTQRR*YGYPQNQGDNXGKNM*AKGXPXA 557
           R   +C  G +PLPR LTR ARSFGCGERY+LT           GD        K     
Sbjct: 26  RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT----------DGDGNFLEDTRKTLSKE 75

Query: 558 RNRKKAALLSVFP*APPPWTSXTKIDAQVKGGXTRQDXKXPXRXPPGSLPRASSWFRPCR 737
             R + +  S+      P TS  K DAQ+ GG TRQD K P R P  + P  +  F P  
Sbjct: 76  EIRPRRSRFSI---GSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVA-PSCALLFLPFG 131

Query: 738 FP 743
            P
Sbjct: 132 LP 133


>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 52.0 bits (119), Expect = 2e-05
 Identities = 26/45 (57%), Positives = 28/45 (62%)
 Frame = +3

Query: 609 PWTSXTKIDAQVKGGXTRQDXKXPXRXPPGSLPRASSWFRPCRFP 743
           P TS TKIDAQV+GG TRQD K   R P    P  +  FRPCR P
Sbjct: 22  PLTSITKIDAQVRGGETRQDYKDTRRFPL-EAPSCALLFRPCRLP 65


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 51.2 bits (117), Expect = 4e-05
 Identities = 29/54 (53%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 354 CXNESAXARGEAVCVLGALPLPRXLTRCARSFGCGERYQL-TQRR*YGYPQNQG 512
           C  + A AR EAV VL ALPL R  TRC RS GCG      +  R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 37.9 bits (84), Expect = 0.37
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = +3

Query: 609 PWTSXTKIDAQVKGGXTRQDXKXPXRXPPGSLPRASSWFRP 731
           P TS TK DAQ+ GG TRQD K   R P  + P  +  F P
Sbjct: 58  PLTSITKSDAQISGGETRQDYKDTRRFPLAA-PSCALLFLP 97


>UniRef50_Q9KXZ1 Cluster: Putative secreted protein; n=2;
           Streptomyces|Rep: Putative secreted protein -
           Streptomyces coelicolor
          Length = 533

 Score = 34.3 bits (75), Expect = 4.5
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +2

Query: 692 SWKPPSCVLLVPTLPLPGIPVPXFLPF 772
           ++ PPSCVL+   LP+PG P P +L F
Sbjct: 301 AYLPPSCVLIEQGLPVPGPPDPEYLIF 327


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,766,451
Number of Sequences: 1657284
Number of extensions: 8186034
Number of successful extensions: 14927
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14912
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)