Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M06
         (939 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0082 + 625198-625719                                             31   1.7  
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575...    29   7.1  

>01_01_0082 + 625198-625719
          Length = 173

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = +3

Query: 603 PPPWTSXTKIDAQVKGGXTRQDXKXPXRXP-PGSLPRASSWFRPCRFPXYLFRLFSPSGT 779
           PPP T  T       GG        P   P PG  P  S WF P   P YL    +P GT
Sbjct: 84  PPPTTPSTNCPPPPYGGGGYNPT--PSYNPTPGYNPTPSGWFTPPNMPSYL----TPPGT 137

Query: 780 XW 785
            +
Sbjct: 138 LY 139


>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
            27757626-27758249,27759048-27759596,27759665-27760372,
            27760449-27760658,27761266-27761421,27761524-27761664,
            27762015-27762101,27762209-27762309,27763071-27763293,
            27763384-27763548,27763621-27763713,27763801-27764292,
            27764729-27764805,27765184-27765681,27765818-27766046
          Length = 1855

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -1

Query: 906  PEXGPGGRGXXGXGSTQARXGAKXP*TXGXIPNG 805
            P  G GGRG  G GS     G +     G +P G
Sbjct: 1605 PSNGRGGRGGRGRGSRGGSRGGRSRSRGGKVPRG 1638


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,298,488
Number of Sequences: 37544
Number of extensions: 256780
Number of successful extensions: 553
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)