Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_M04
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64859-1|AAC69092.2|  468|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical...    29   4.4  
L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase prot...    28   7.8  
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U64859-1|AAC69092.2|  468|Caenorhabditis elegans Hypothetical
           protein R09F10.3 protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 21/63 (33%), Positives = 28/63 (44%)
 Frame = +2

Query: 566 DPVSSKTTHSTMPSPK*TKTNCRKLTTIRMTHQTRVMRVLSPTVLLKRTTNLXRLDRCSN 745
           DP ++ T  +T  S     +     TT   T  T   RV SPT+    T     + RC+N
Sbjct: 85  DPAATTTAATTSASTTSITSTAATTTTTTTTGTTATGRV-SPTIP-PETLFHDAIKRCNN 142

Query: 746 CLF 754
           CLF
Sbjct: 143 CLF 145


>AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical
           protein Y43F8C.14 protein.
          Length = 709

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +3

Query: 153 VVMEKEHQPDSMATITMKPEY--PPSEVYSTSEPPPAYRHRVSTSV 284
           +V++K   P ++AT T KP    PP      SEPPPA++    +S+
Sbjct: 275 IVVKKLQAPIALATSTPKPAMCRPPKH----SEPPPAFQDSFVSSI 316


>L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase protein
           1 protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 145 CLSKFIYCSSLGNAHCV*CSKLKCG 71
           C S++++C + GN HCV  +K+K G
Sbjct: 393 CGSQYLFCDTRGNPHCV--AKVKPG 415


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
            protein Y55F3BR.2 protein.
          Length = 1594

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +3

Query: 51   CPKLSADPHFNFEHQTQCALPRDEQ*INFDKQY*VVMEKE---HQPDSMATITMKPEYPP 221
            C  +S +PHF  E    C L  D+  +    Q+  V  +       +S    T KP  PP
Sbjct: 1356 CVIMSEEPHFVEEKLVSCVLTNDDCPVGLKCQFSEVASQNVCCGPKNSPKNATEKPTEPP 1415

Query: 222  SEVYSTS 242
            +   ST+
Sbjct: 1416 TTQASTT 1422


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,692,761
Number of Sequences: 27780
Number of extensions: 375503
Number of successful extensions: 1183
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)