Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_M03
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800 33 0.23
08_01_1038 + 10540185-10540709 33 0.40
02_02_0310 - 8842286-8843314 32 0.70
05_03_0506 - 14801920-14802219 31 0.93
02_02_0125 - 7026037-7027377 31 0.93
03_05_0786 + 27691451-27691688,27692376-27692479,27692600-276926... 31 1.2
10_06_0171 + 11466934-11466990,11467073-11468312,11468450-114685... 30 2.1
06_03_0516 + 21661696-21662490 30 2.1
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 30 2.8
08_01_0573 - 5101268-5101918 29 5.0
03_04_0035 - 16685674-16686376,16686594-16686640 29 5.0
12_02_1155 + 26541137-26541142,26541244-26542623,26542730-265428... 29 6.6
02_05_0688 - 30918499-30919602 29 6.6
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 28 8.7
02_04_0380 - 22494330-22494854,22494979-22494984 28 8.7
02_04_0260 - 21350060-21350269,21350544-21350604,21350834-213509... 28 8.7
01_06_0288 - 28228673-28228744,28228866-28229071,28229316-282295... 28 8.7
>09_03_0129 - 12590983-12591315,12591432-12591705,12591816-12593800
Length = 863
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 635 PESCCVKKSILSTFAGNNCTVDAA 706
P SCCV+K I+S F NCT D A
Sbjct: 53 PASCCVRKIIVSNFLPLNCTKDEA 76
>08_01_1038 + 10540185-10540709
Length = 174
Score = 32.7 bits (71), Expect = 0.40
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -3
Query: 745 SGRARRSWTAA----GIRGVDRAVVAGEGREDALLDAAGLGQRELTVVDSASVTAAFELS 578
SGR R S AA G+ G + AVV EGR +++ AG RE + SASV A +
Sbjct: 91 SGRCRGSVVAAAGSVGVVGEEAAVVRMEGRGGSVVADAG-SAREAAALASASVATA---A 146
Query: 577 LQFREDSLGG 548
RED GG
Sbjct: 147 GSAREDDGGG 156
>02_02_0310 - 8842286-8843314
Length = 342
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 445 HHLHNDDHQQEDCVRDDHAVTLAYRSTA-SQERDHEHYSPDDYEDPRTDSKM 293
HH H+D++++++ + D A R + + R H H+ DD+E + M
Sbjct: 194 HHHHHDENEEDEHEQADEASPAVERLISFHRRRHHHHHHEDDHEQREEGAPM 245
>05_03_0506 - 14801920-14802219
Length = 99
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -3
Query: 832 NWRGTARTGLXPXQHKQHREQRRL*ACSISGRARRSWTAAGIRGVDRAVVAGEG 671
+WR TAR ++ E RRL + AR+SW G D A V GEG
Sbjct: 19 SWRSTARGAATKLVVRRQGELRRLGPRAADLVARKSWAVGDGEGTDPA-VGGEG 71
>02_02_0125 - 7026037-7027377
Length = 446
Score = 31.5 bits (68), Expect = 0.93
Identities = 28/85 (32%), Positives = 40/85 (47%)
Frame = -3
Query: 757 ACSISGRARRSWTAAGIRGVDRAVVAGEGREDALLDAAGLGQRELTVVDSASVTAAFELS 578
A S+ R+ A+G+R A A A L AAG G EL +VD + AA
Sbjct: 24 ASSLRRRSSSRVAASGLRASVSASTATSSTSMAQLVAAGGGIDELRLVDERAAVAA---- 79
Query: 577 LQFREDSLGGLVCVSVRSLFE*HAD 503
LQ ++ +GG +R++ E AD
Sbjct: 80 LQQQQLPVGGCEVEKLRAVAEAAAD 104
>03_05_0786 +
27691451-27691688,27692376-27692479,27692600-27692671,
27693231-27693404,27693603-27693726,27695154-27695200,
27695381-27695593
Length = 323
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +1
Query: 610 YQLRSVHVARVLLRQE--EHPLYLRRQQLHG--RRRESRLRSKIGELYQKWNKP 759
+QL + +R+ L E E P+Y+ +Q HG RRR+SR ++++ + K KP
Sbjct: 144 FQLPGLTHSRMPLPLEISEEPVYVNAKQYHGILRRRQSRAKAELEKKVVKSRKP 197
>10_06_0171 +
11466934-11466990,11467073-11468312,11468450-11468596,
11469650-11470140
Length = 644
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 481 DALAVGEEEDADHHLHNDDHQQEDCVRDDHAV 386
D + EE+D DHH H+ H D +HA+
Sbjct: 320 DTFRIAEEDDDDHHHHHHYHGDADDDDGEHAM 351
>06_03_0516 + 21661696-21662490
Length = 264
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -3
Query: 739 RARRSWTAAGIRGVDRAVVAGEGREDALLDAAGLG 635
R RR G RGV R + R DA+ DAAG G
Sbjct: 110 RRRRGQQGGGGRGVGRVAGEADPRADAMADAAGDG 144
>06_03_1283 - 28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -3
Query: 472 AVGEEEDADHHLH--NDDHQQEDC 407
++ EE +DHH H N++H+ EDC
Sbjct: 969 SISIEESSDHHEHHHNEEHKAEDC 992
>08_01_0573 - 5101268-5101918
Length = 216
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -3
Query: 748 ISGRARRSWTAAGIRGVDRAVV-AGEGREDAL 656
I GR RR WT G+ G RAV A G D L
Sbjct: 89 IGGRGRRGWTQHGVAGWRRAVAEAARGVMDNL 120
>03_04_0035 - 16685674-16686376,16686594-16686640
Length = 249
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 490 ALLDALAVGEEEDADHHLHNDDHQQE 413
ALL L E++D DHH H+ H +
Sbjct: 224 ALLGQLEAEEDDDGDHHHHHHHHHHQ 249
>12_02_1155 +
26541137-26541142,26541244-26542623,26542730-26542852,
26542996-26543168,26543332-26543572,26543931-26544023,
26544092-26544232,26544358-26544450,26544633-26544837,
26544993-26545078,26545532-26545620,26545736-26545820,
26545898-26545954,26546319-26546399,26547130-26547321
Length = 1014
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 373 DTRESLHGRHVRNLLAGDHHCASGDQRPPLHLRREHQ 483
++ + L G V N+L GDH A +QR +R+ Q
Sbjct: 763 NSTDDLSGPDVSNVLVGDHQPADAEQRAQKREQRQKQ 799
>02_05_0688 - 30918499-30919602
Length = 367
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 652 DAAGLGQREL-TVVDSASVTAAFELSLQFREDSLGGLVCVSVRSLFE*HADAIHNALLDA 476
+ G G EL T V ++ + FE+ FR D++ GL+ SVR+ E + N L D
Sbjct: 96 EGCGGGVGELRTAVAASFPSLRFEI-YPFRADAVTGLISASVRAALEAPLNYARNYLADL 154
Query: 475 L 473
L
Sbjct: 155 L 155
>03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 481 DALAVGEEEDADHHLHNDDHQQEDCVRDDHAVTLAYRSTASQERDHEHYSPDD 323
DA G E+A H H C RDD V + +S+ +D++ DD
Sbjct: 1209 DAKNCGSGEEAGDHDSERTHGTLPCSRDDEPVHVPSDFGSSKSQDNQRDEDDD 1261
>02_04_0380 - 22494330-22494854,22494979-22494984
Length = 176
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 745 SGRARRSWTAAGIRGVDRAVVAGEGREDALLDAAGLGQRELT 620
+G A+ AA + GV+ +AGEGR + +G+ LT
Sbjct: 16 NGNAKAMKVAAAMDGVESVTLAGEGRNLLRVVGSGVDSNHLT 57
>02_04_0260 -
21350060-21350269,21350544-21350604,21350834-21350901,
21351274-21351483,21351684-21351724,21351923-21351972,
21352084-21352172,21352265-21352339,21352539-21352656,
21352689-21352771,21352854-21352970,21353857-21354074,
21354184-21354241,21354356-21354508
Length = 516
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -1
Query: 366 QHPKNAITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 235
QH +N I MK H P +W+ L+ Q I++ P
Sbjct: 187 QHWENKIQASDENGMMKEHSPLGKWIIGMKLSGPQMIKHVQEFP 230
>01_06_0288 -
28228673-28228744,28228866-28229071,28229316-28229554,
28229649-28229705,28229787-28229873,28229963-28230507,
28231574-28231714
Length = 448
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +1
Query: 436 ASGDQRPPLHLRREH---QGEHYGWRRR 510
A+ + PL LRRE +GE GWRRR
Sbjct: 3 AAAREEQPLLLRREEGEEEGEEVGWRRR 30
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,121,810
Number of Sequences: 37544
Number of extensions: 435612
Number of successful extensions: 1755
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1749
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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