Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L23
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical pr...    59   4e-09
Z79694-3|CAB01962.3|  594|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AY387697-1|AAR26326.1|  594|Caenorhabditis elegans SOL-1 protein.      30   2.6  
U50308-1|AAG24026.2|  132|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U41105-10|AAA82404.1|  238|Caenorhabditis elegans Hypothetical p...    29   5.9  
AL032651-1|CAB60580.1|  681|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical
           protein M03C11.4 protein.
          Length = 541

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 28/95 (29%), Positives = 57/95 (60%)
 Frame = +3

Query: 369 VVDGNDVLEFKLVRSVDDLENEETSFGPDMCHQVFGENENIFGYTDLHIKLYYSAGSLQT 548
           + DG  V++   ++++ ++      + P+M +Q FG+ E IFGY DL + ++++A +L +
Sbjct: 146 ISDGLAVVKMTFLKNMQEISTAPR-YEPEMVYQHFGDEETIFGYEDLEVTIHHTAQTLYS 204

Query: 549 YLGIDYTDKIEPSKSEGMKADDVEGALTKVIAPGV 653
           Y+ + Y+ K +     G++ADDV   + K++ P V
Sbjct: 205 YINVSYSSKAK--NENGLEADDV---IDKLVHPDV 234



 Score = 36.3 bits (80), Expect = 0.030
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = +2

Query: 749 FDGESRSFEVYYCETSTQGFLEYHQRLQTFLLWYVDAASFIDVDDDQW 892
           F+ + +S+EVY     T+ F  + +R+QT  +++++  S  D  +D W
Sbjct: 266 FELKGKSYEVYKVAEQTEEFNLFLERIQTLGMFFIECCSLTDNTEDNW 313


>Z79694-3|CAB01962.3|  594|Caenorhabditis elegans Hypothetical
           protein C15A11.3 protein.
          Length = 594

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 319 PEQFPRKFYCQYFFNIAKMEVCNLHF 242
           P  +PR  YC+Y F+    +V ++HF
Sbjct: 455 PGLYPRNLYCEYIFHGRNDQVVHIHF 480


>AY387697-1|AAR26326.1|  594|Caenorhabditis elegans SOL-1 protein.
          Length = 594

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 319 PEQFPRKFYCQYFFNIAKMEVCNLHF 242
           P  +PR  YC+Y F+    +V ++HF
Sbjct: 455 PGLYPRNLYCEYIFHGRNDQVVHIHF 480


>U50308-1|AAG24026.2|  132|Caenorhabditis elegans Hypothetical
           protein F07C3.2 protein.
          Length = 132

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 357 KHQSFCKINNGFCRSNSRVNFIVNIFLIL 271
           K +SF      +C + SRV+FIV+IF ++
Sbjct: 97  KGESFFCTGKHYCNNTSRVSFIVSIFSVI 125


>U41105-10|AAA82404.1|  238|Caenorhabditis elegans Hypothetical
           protein T02G5.3 protein.
          Length = 238

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 466 RYLERMRIYLDIQIYTLNYITVQEVF 543
           +Y  R+R+YL   ++ LN+  + ++F
Sbjct: 192 KYQNRLRLYLGFCVFALNFFVIDQIF 217


>AL032651-1|CAB60580.1|  681|Caenorhabditis elegans Hypothetical
           protein Y6D1A.1 protein.
          Length = 681

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = -1

Query: 390 KRRSHQQLSGTKHQSFC----KINNGFCRSNSRVNFIVNIFLILQKWRCVIYISIPIESK 223
           +RR  Q+L+ + HQ       + NNG  R  S VNF VN F+   K  CV+  +     +
Sbjct: 408 QRRDRQELTDSSHQQQREHKKRFNNGLYRRISEVNF-VNEFV---KHPCVLCGNRHTVDQ 463

Query: 222 FCFTLLTAENLHE 184
            CF ++   N  E
Sbjct: 464 -CFKIINVNNRRE 475


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,560,620
Number of Sequences: 27780
Number of extensions: 461667
Number of successful extensions: 997
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)