Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L23
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.8  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   5.0  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   5.0  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   5.0  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   6.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   6.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   6.6  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   6.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   8.7  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 839 EMFVNVDGILENLELKSHNNILQMICSLHQKGVTLNAC 726
           E FV+V        LK+H  +L    S  QK +  N C
Sbjct: 33  EAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPC 70


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 702 IHTTWKNAACIQCNPLLMERADH 770
           +   W  AACI   PLL+   +H
Sbjct: 162 VSLVWLGAACISLPPLLIMGNEH 184


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -3

Query: 160 IFLASIPSPWICLL*N--GFPKYS 95
           IF+   P PWIC L N  G+  YS
Sbjct: 228 IFVPVKPCPWICELTNDAGYVVYS 251


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +3

Query: 462 HQVFGENENIFGYTDLHIKLYYSAGSLQTYLGIDYTDKI 578
           H++     N + Y + + K  Y     + Y  I+Y ++I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQI 117


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +3

Query: 462 HQVFGENENIFGYTDLHIKLYYSAGSLQTYLGIDYTDKI 578
           H++     N + Y + + K  Y     + Y  I+Y ++I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQI 117


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +3

Query: 462 HQVFGENENIFGYTDLHIKLYYSAGSLQTYLGIDYTDKI 578
           H++     N + Y + + K  Y     + Y  I+Y ++I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYIEQI 117


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 806 NLELKSHNNILQMICS 759
           N  LKSH+N+ Q  C+
Sbjct: 33  NSHLKSHSNVYQYRCA 48


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 655 ITNLDHFVSQLKKDESFTPHGK 720
           IT  DHF S L    S   H K
Sbjct: 459 ITYFDHFESMLNNGVSIQSHAK 480


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 655 ITNLDHFVSQLKKDESFTPHGK 720
           IT  DHF S L    S   H K
Sbjct: 459 ITYFDHFESMLNNGVSIQSHAK 480


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 655 ITNLDHFVSQLKKDESFTPHGK 720
           IT  DHF S L    S   H K
Sbjct: 85  ITYFDHFESMLNNGVSIQSHAK 106


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 498 YTDLHIKLYYSAGSLQTYL 554
           Y D+H+ ++   G L T+L
Sbjct: 55  YQDVHVMIWIGFGFLMTFL 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,608
Number of Sequences: 438
Number of extensions: 5148
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)