Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_L21
(980 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.80
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 3.2
01_05_0513 - 22864657-22867899 30 3.2
08_02_1256 + 25645085-25645396 29 4.3
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 4.3
03_02_0738 - 10824121-10825572 29 4.3
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 5.7
12_02_1174 - 26696869-26698191 29 7.5
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 7.5
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 7.5
08_01_0059 - 394001-394708 29 7.5
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 29 7.5
07_01_0080 + 587674-588510 29 7.5
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 7.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.5
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 29 7.5
01_06_1321 + 36280691-36281269 29 7.5
09_04_0506 - 18188785-18190599 28 9.9
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.9 bits (69), Expect = 0.80
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PPG PP
Sbjct: 48 PPPFLAPPPPPPPGPPP 64
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 116 PPPSAPPPPPPPPTQPP 132
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPPXXR 708
PPP PP P PP PP R
Sbjct: 353 PPPPPPPPPPPPPPPPPPPR 372
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 358 PPPPPPPPPPPPPPRPP 374
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 359 PPPPPPPPPPPPPRPPP 375
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 362 PPPPPPPPPPRPPPPPP 378
>01_05_0513 - 22864657-22867899
Length = 1080
Score = 29.9 bits (64), Expect = 3.2
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 649 PPPXXXPPXPGPPG 690
PPP PP PGPPG
Sbjct: 6 PPPESGPPPPGPPG 19
>08_02_1256 + 25645085-25645396
Length = 103
Score = 29.5 bits (63), Expect = 4.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 62 PPPPPPPPLPSPPPPPP 78
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.5 bits (63), Expect = 4.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 276 PPPPAGPPPPAPPPLPP 292
>03_02_0738 - 10824121-10825572
Length = 483
Score = 29.5 bits (63), Expect = 4.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 88 PPPLSFPPPPPPPSSPP 104
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 5.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP PPG PP
Sbjct: 150 PPPPPPPPPHAPPGPPP 166
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 148 PPPSLPPPPPPPPPPPP 164
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 73 PPPPQTPPSPPPPPPPP 89
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 425 PPPPPLPPPPPPPPPPP 441
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 426 PPPPLPPPPPPPPPPPP 442
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 427 PPPLPPPPPPPPPPPPP 443
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 434 PPPPPPPPPPLPPNMPP 450
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 19 PPPRRAPPPPSPPIRPP 35
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 98 PPPPELPPPPPPPPLPP 114
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 104 PPPPPPPPPPPPPPPPP 120
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 105 PPPPPPPPPPPPPPPPP 121
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 349 PPPPPPPPPPPPPPPPP 365
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P P G PP
Sbjct: 330 PPPKAAPPPPPPKGPPP 346
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 38 PPPPPPPPPPPPPPPPP 54
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 39 PPPPPPPPPPPPPPPPP 55
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 40 PPPPPPPPPPPPPPPPP 56
>01_06_1321 + 36280691-36281269
Length = 192
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 649 PPPXXXPPXPGPPGXPP 699
PPP PP P PP PP
Sbjct: 143 PPPSPPPPPPPPPPLPP 159
>09_04_0506 - 18188785-18190599
Length = 604
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 698 GGXPGGPGXGGXXXGGG 648
GG GGPG GG GGG
Sbjct: 314 GGGGGGPGGGGGGGGGG 330
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,137,101
Number of Sequences: 37544
Number of extensions: 213647
Number of successful extensions: 1889
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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