Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L21
         (980 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.28 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.6  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.28
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -1

Query: 698 GGXPGGPGXGGXXXGGG 648
           GG  GGPG GG   GGG
Sbjct: 216 GGSSGGPGPGGGGGGGG 232



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -2

Query: 685 GGRAXGGXPXGGX-ALXGPGP 626
           GG + GG P GG  +  GPGP
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGP 224


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = +1

Query: 649 PPPXXXPPXP-GPPGXP 696
           PPP   PP P GPP  P
Sbjct: 581 PPPAPPPPPPMGPPPSP 597


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,654
Number of Sequences: 2352
Number of extensions: 5128
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107296839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)