Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L20
         (893 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071634-1|AAL49256.1|  372|Drosophila melanogaster RE67859p pro...    60   5e-09
AE014296-3708|AAF51853.1|  372|Drosophila melanogaster CG14450-P...    60   5e-09

>AY071634-1|AAL49256.1|  372|Drosophila melanogaster RE67859p
           protein.
          Length = 372

 Score = 59.7 bits (138), Expect = 5e-09
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
 Frame = +2

Query: 320 SGSRCCYQ--NLESKYSESQKVKILNVINDDSQT-LSRFDIAKSRLKKFKQWKTSNGQVK 490
           SG   C Q   L   YS++ ++KIL  IN+ S   ++ +DI K+R  K + WK  +G ++
Sbjct: 25  SGQPECDQAIGLLPAYSDADRLKILKTINESSMNQIANYDITKARATKLQNWKNRHGPLQ 84

Query: 491 TLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQI 592
            LSD+  +EGF  K   K   S+L  P+    Q+
Sbjct: 85  ELSDILYVEGFGLKVTTKFFKSLLAPPSSGSAQV 118


>AE014296-3708|AAF51853.1|  372|Drosophila melanogaster CG14450-PA
           protein.
          Length = 372

 Score = 59.7 bits (138), Expect = 5e-09
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
 Frame = +2

Query: 320 SGSRCCYQ--NLESKYSESQKVKILNVINDDSQT-LSRFDIAKSRLKKFKQWKTSNGQVK 490
           SG   C Q   L   YS++ ++KIL  IN+ S   ++ +DI K+R  K + WK  +G ++
Sbjct: 25  SGQPECDQAIGLLPAYSDADRLKILKTINESSMNQIANYDITKARATKLQNWKNRHGPLQ 84

Query: 491 TLSDLPLIEGFTDKTAKKLCDSILNGPTEEVEQI 592
            LSD+  +EGF  K   K   S+L  P+    Q+
Sbjct: 85  ELSDILYVEGFGLKVTTKFFKSLLAPPSSGSAQV 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,708,737
Number of Sequences: 53049
Number of extensions: 457888
Number of successful extensions: 1044
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)