Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L14
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0111 + 5381779-5382117,5382775-5382798                           52   8e-07
07_03_0548 + 19349943-19350290,19350372-19351100                       50   3e-06
02_01_0175 - 1198657-1198737,1199080-1199190,1199488-1199540,120...    46   4e-05
07_01_1103 + 10141766-10143583                                         29   3.7  
03_01_0006 + 65675-65808,66385-66457,68290-68526,68648-68785,688...    29   6.4  
06_03_1032 + 27029698-27029785,27030640-27031275,27031739-270319...    28   8.5  
01_01_0994 - 7861310-7862119,7862378-7862498,7862718-7862901,786...    28   8.5  

>10_02_0111 + 5381779-5382117,5382775-5382798
          Length = 120

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = +3

Query: 510 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 689
           Q+ L  P L+D IV  +G     TV E+GPG G +T+ +++   K +V +E DPR +  L
Sbjct: 40  QHILRNPALVDSIVEKAGLKPTDTVLEIGPGTGNLTKRLLQAGVKAVVAVELDPRMVLEL 99


>07_03_0548 + 19349943-19350290,19350372-19351100
          Length = 358

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
 Frame = +3

Query: 483 KLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIE 662
           + R  +   Q+ L  PR++D IVR +       V EVGPG G +T  ++     ++  +E
Sbjct: 34  RFRLHKPRGQHLLTNPRVLDAIVRRAALRPGDAVLEVGPGTGNLTVRLLESPAARVSAVE 93

Query: 663 KDPRFLPSLELLADACRDKVDVDIITGDILKTD*SXFIPNDAKVHWLDPPPPVH--LIGN 836
            DPR + ++    DA      + +I  D ++ +   F    A + +    P +   L G 
Sbjct: 94  IDPRMVDAVTARVDALGLAHKLTVIRADAVEAEFPEFDVCVANIPYGISSPLIAKLLFGP 153

Query: 837 LPFSVSTILI 866
             F  +T+L+
Sbjct: 154 YRFRAATLLL 163


>02_01_0175 -
           1198657-1198737,1199080-1199190,1199488-1199540,
           1200131-1200215,1200519-1200614,1200729-1200821,
           1201640-1201696,1201826-1201975,1202819-1202893
          Length = 266

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
 Frame = +3

Query: 510 QNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQAPKKLVLIEKDPRFLPSL 689
           +N+++  ++ +++V A+G  +   V E+GPG G +T +++  A   +  +EKD       
Sbjct: 25  ENYMLNSKVNEELVAAAGVEEGDVVLEIGPGTGSLTAALL-DAGATVFAVEKDKHM---A 80

Query: 690 ELLADACRDKVDVDIITGDILKTD-*SXFIP-NDAKVHWLDPPPPVHLIGNLPFSVSTIL 863
            L+ D       + II  DI K +  S F+P  + K H       V  + NLPF+VST +
Sbjct: 81  TLVNDRFGSTEQLKIIEEDITKFNVRSHFLPFLEEKSHHTRKYAKV--VSNLPFNVSTEV 138

Query: 864 I 866
           +
Sbjct: 139 V 139


>07_01_1103 + 10141766-10143583
          Length = 605

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
 Frame = -3

Query: 817 GGGGSNQWTFASFGINX----L*SVFKISPVIMSTSTLSRQASAKSSNDGKNRGSFSIKT 650
           G  GS+ W    + +        S  ++  V  S     R+   +S  DG  R   + ++
Sbjct: 130 GERGSSGWVMHEYAVTSPAELAASPIRLYRVRFSGHGKKRKREPQSGEDGVGRARAAPQS 189

Query: 649 SFLGACLIIDRVIPPGPGPTS 587
           +     L+ +RV+PP P P S
Sbjct: 190 AGTETALLEERVMPPQPAPQS 210


>03_01_0006 +
           65675-65808,66385-66457,68290-68526,68648-68785,
           68871-69005,69131-69310,69495-69701,69821-69943,
           70240-70359,70758-70880,72067-72171,72254-72398,
           73443-73607,73669-73907,74452-74484,74977-75058,
           75200-75360,75739-75951,76789-76971,77051-77220,
           77375-77474
          Length = 1021

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 672 RFLPSLELLADACRDKVDVDIIT-GDILKTD*SXFIPNDAKVHWLDP 809
           R  P  ++L D   D++D  ++  GDI+       IP DA++   DP
Sbjct: 188 RLAPKAKVLRDGTWDELDASLLVPGDIISVKLGDIIPADARLLEGDP 234


>06_03_1032 +
           27029698-27029785,27030640-27031275,27031739-27031993,
           27032451-27032605,27032704-27032783,27032891-27033026,
           27033228-27033377,27033474-27033641
          Length = 555

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +3

Query: 372 DFDEPPXNTAVIMAVAKTALQIRLPPLPSIKDVIKLYKLRALRE-LSQNFLMEPRLIDKI 548
           D    P   A I+AVA   +       PS+K V++   L+  RE L    +  P+L+  +
Sbjct: 469 DVGYDPEEMAHILAVASMCIHHSSSSRPSMKSVVRF--LKGDRESLEMMQMQRPKLMKPL 526

Query: 549 VRASGNIQNHT 581
           +  SG+ +++T
Sbjct: 527 MFDSGDSEDYT 537


>01_01_0994 -
           7861310-7862119,7862378-7862498,7862718-7862901,
           7862975-7863070,7863428-7863476,7863555-7863596,
           7863684-7863836,7865631-7865705,7866462-7866587
          Length = 551

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = -3

Query: 697 KSSNDGKNRGSFSIKTSFLGACLIIDRVIPPGPGPTSQT 581
           KSS  G   GSF  K+   G+   ID  IP  PGP S T
Sbjct: 377 KSSGQGGFFGSFFRKSLKKGSFHDIDPGIPTTPGPQSAT 415


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,025,154
Number of Sequences: 37544
Number of extensions: 452212
Number of successful extensions: 1097
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)