Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L13
         (937 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.8  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   7.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +3

Query: 705 RXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRXP 812
           R P G    P   PP  PP   PP  P P      P
Sbjct: 568 RFPAGFPNLPNAQPPPAPPP-PPPMGPPPSPLAGGP 602



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
 Frame = +3

Query: 732 PXRFPPXXPPXGXPPWXPXPGXFXRXPG--PXLXPLWGXXGA 851
           P   PP  PP G PP     G      G  P L  L G  GA
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGA 622


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 571 GXPPXXGETXXPPLGGXXPVXPAGXPGAXG 482
           G P   G+    P G   P  PAG PGA G
Sbjct: 149 GPPGYPGDVG--PKGEPGPKGPAGHPGAPG 176


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 16/52 (30%), Positives = 20/52 (38%)
 Frame = +2

Query: 422 PXPRGXXVGFWGXXPXPRPXXRXPRXSGGGXXXXPPQGGXSGFPXXRGXPXE 577
           P P+G   G+ G  P P      P   G G        G +GFP  +G   E
Sbjct: 476 PGPQGPR-GYPGQ-PGPEGLRGEPGQPGYGIPGQKGNAGMAGFPGLKGQKGE 525


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 18/68 (26%), Positives = 18/68 (26%)
 Frame = -1

Query: 847 PXXPQRGXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGA 668
           P     G   GP       G G  GG   G   G    G         H    G    G 
Sbjct: 78  PPQTSLGLSHGPSPGAGGTGSGGSGGGSGGIGSGALHLGQNPNLHHHHHHHHHGNNGGGN 137

Query: 667 XXGGGXXG 644
             GGG  G
Sbjct: 138 GGGGGSGG 145


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,458
Number of Sequences: 2352
Number of extensions: 7733
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)