Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_L13
(937 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 46 3e-05
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.010
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.073
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.073
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.073
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.22
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 33 0.22
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.22
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 33 0.22
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 33 0.22
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 0.90
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 0.90
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.2
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.1
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 30 2.7
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.7
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 30 2.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.4
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.8
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 29 4.8
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 29 4.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.8
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 4.8
U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protei... 29 4.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.8
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 29 6.3
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 29 6.3
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 6.3
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 28 8.3
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 28 8.3
AC025724-6|AAG23373.2| 158|Caenorhabditis elegans Hypothetical ... 28 8.3
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 46.4 bits (105), Expect = 3e-05
Identities = 45/172 (26%), Positives = 48/172 (27%), Gaps = 4/172 (2%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVS--PXXGGXPXKXLXXKG 596
PP G F P+ P P P+G P G S P GG P
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 340
Query: 597 PXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXP--PXGX 770
P G P +G P PP P G P P P P P G
Sbjct: 341 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 400
Query: 771 PPWXPXPGXFXRXPGPXLXPLWGXXGAXXXXXXXXXGXPXFXVGPXPPPXXG 926
PP PG F P P G G G P P P G
Sbjct: 401 PPSGGPPGPFNPSGAP---PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 449
Score = 46.0 bits (104), Expect = 4e-05
Identities = 45/172 (26%), Positives = 48/172 (27%), Gaps = 4/172 (2%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVS--PXXGGXPXKXLXXKG 596
PP G F P+ P P P+G P G S P GG P
Sbjct: 236 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA 295
Query: 597 PXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXP--PXGX 770
P G P +G P PP P G P P P P P G
Sbjct: 296 PPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 355
Query: 771 PPWXPXPGXFXRXPGPXLXPLWGXXGAXXXXXXXXXGXPXFXVGPXPPPXXG 926
PP PG F P P G G G P P P G
Sbjct: 356 PPSGGPPGPFDPSGAP---PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG 404
Score = 44.4 bits (100), Expect = 1e-04
Identities = 44/171 (25%), Positives = 47/171 (27%), Gaps = 4/171 (2%)
Frame = +3
Query: 426 PXGXXXLXFGXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVS--PXXGGXPXKXLXXKGP 599
P G F P+ P P P+G P G S P GG P P
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP 371
Query: 600 XXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXP--PXGXP 773
G P +G P PP P G P P P P P G P
Sbjct: 372 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAP 431
Query: 774 PWXPXPGXFXRXPGPXLXPLWGXXGAXXXXXXXXXGXPXFXVGPXPPPXXG 926
P PG F P P G G G P P P G
Sbjct: 432 PSGGPPGPFNPSGAP---PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSG 479
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/136 (27%), Positives = 40/136 (29%), Gaps = 4/136 (2%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVS--PXXGGXPXKXLXXKG 596
PP G F P+ P P P+G P G S P GG P
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 430
Query: 597 PXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXP--PXGX 770
P G P +G P PP P G P P P P P G
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 490
Query: 771 PPWXPXPGXFXRXPGP 818
PP PG F P
Sbjct: 491 PPSGGPPGPFNPSGAP 506
Score = 39.9 bits (89), Expect = 0.003
Identities = 43/168 (25%), Positives = 49/168 (29%), Gaps = 4/168 (2%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXPAXXPXAPGXPAGX--TGXXPPKGGXXVSPXXGGXPXKXLXXKG 596
PP G F P+ P P+G +G P G +P GG P +
Sbjct: 146 PPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEA 205
Query: 597 PXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXP--PXGX 770
P G +G P PP P G P P P P P G
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 265
Query: 771 PPWXPXPGXFXRXPGPXLXPLWGXXGAXXXXXXXXXGXPXFXVGPXPP 914
PP PG F P P G G G P GP P
Sbjct: 266 PPSGGPPGPFDPSGAP---PSGGPPGPFDPSGAPPSGGPP---GPFDP 307
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/122 (27%), Positives = 36/122 (29%), Gaps = 4/122 (3%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVS--PXXGGXPXKXLXXKG 596
PP G F P+ P P P+G P G S P GG P
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 460
Query: 597 PXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXP--PXGX 770
P G P +G P PP P G P P P P P G
Sbjct: 461 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 520
Query: 771 PP 776
PP
Sbjct: 521 PP 522
Score = 37.9 bits (84), Expect = 0.010
Identities = 33/125 (26%), Positives = 36/125 (28%), Gaps = 2/125 (1%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVS--PXXGGXPXKXLXXKG 596
PP G F P+ P P P+G P G S P GG P
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA 475
Query: 597 PXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPP 776
P G P +G P PP P G P G P PP P
Sbjct: 476 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG---PPGPFDPSGAPPSGMPPVPLPT 532
Query: 777 WXPXP 791
P P
Sbjct: 533 DLPIP 537
Score = 35.1 bits (77), Expect = 0.073
Identities = 39/158 (24%), Positives = 41/158 (25%), Gaps = 2/158 (1%)
Frame = +3
Query: 459 PSRXPAXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAG 638
PSR P P K +P GG P P G P +G
Sbjct: 115 PSRSPHSDAPEPSAATDGFELVFGKHHSTGAPPSGGPPGPFDPSGAPPSGGPPGLFDPSG 174
Query: 639 VFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXP--PXGXPPWXPXPGXFXRXP 812
P PP P G P P P P P G PP PG F
Sbjct: 175 APPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSG 234
Query: 813 GPXLXPLWGXXGAXXXXXXXXXGXPXFXVGPXPPPXXG 926
P P G G G P P P G
Sbjct: 235 AP---PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSG 269
Score = 35.1 bits (77), Expect = 0.073
Identities = 37/142 (26%), Positives = 39/142 (27%), Gaps = 2/142 (1%)
Frame = +3
Query: 507 GXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPPXXAPXKXX 686
G G P G +P GG P P G P +G P PP
Sbjct: 150 GPPGPFDPSG----APPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEA 205
Query: 687 PQVXGWRXPXGXLXXPXRFPPXXP--PXGXPPWXPXPGXFXRXPGPXLXPLWGXXGAXXX 860
P G P P P P P G PP PG F P P G G
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAP---PSGGPPGPFNP 262
Query: 861 XXXXXXGXPXFXVGPXPPPXXG 926
G P P P G
Sbjct: 263 SGAPPSGGPPGPFDPSGAPPSG 284
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 37.9 bits (84), Expect = 0.010
Identities = 36/132 (27%), Positives = 42/132 (31%), Gaps = 2/132 (1%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPX 602
PP G FG P + P G P G G PP+ SP G P + P
Sbjct: 322 PPQGAPQQGFGAPPQGPPQG----GPPQGSFGAPPPQQFHAPSPQSFGGPPPPV-SSAPG 376
Query: 603 XGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRF-PPXXPPXG-XPP 776
P + G F P AP P G P + PP P G PP
Sbjct: 377 NFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP 436
Query: 777 WXPXPGXFXRXP 812
PG + P
Sbjct: 437 PPGGPGAYGPPP 448
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.073
Identities = 34/120 (28%), Positives = 39/120 (32%), Gaps = 1/120 (0%)
Frame = +3
Query: 483 PXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPP 662
P PG P G PP + P GG P P G P G G P PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISG---GPPPPPPPP 765
Query: 663 XXA-PXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRXPGPXLXPLWG 839
P P G++ P F P P P + P P + GP WG
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV--IPDYLP-PKKVPKVDGPMRKFPWG 822
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 374 PGPGXGXXGFXCLXXPPXPRGXXVGFWGXXPXPRPXXRXPRXSGGGXXXXPPQGG 538
P P G PP P G G P P P P SGG PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 33.1 bits (72), Expect = 0.29
Identities = 31/96 (32%), Positives = 32/96 (33%)
Frame = +3
Query: 513 TGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQ 692
TG PP G + P GG P P G P G G P PP P P
Sbjct: 710 TGGPPPPPG--LPPITGGPPPPP-----PPGGLPPITG---GPPPPPPPGGLPPISGGPP 759
Query: 693 VXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXF 800
P G P PP G PP P PG F
Sbjct: 760 PPP--PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 29.9 bits (64), Expect = 2.7
Identities = 36/116 (31%), Positives = 39/116 (33%), Gaps = 2/116 (1%)
Frame = +3
Query: 489 APGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPPXX 668
AP AG + PP G P G P GP P G L + PPP
Sbjct: 695 APSTSAGGSSALPPITGGPPPPP--GLPP---ITGGPPP--PPPPGGLPPITGGPPPPP- 746
Query: 669 APXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXG--XPPWXPXPGXFXRXPGPXLXP 830
P P + G P PP PP G PP P PG F P P P
Sbjct: 747 -PPGGLPPISG---------GPP--PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 7/89 (7%)
Frame = +3
Query: 687 PQVXGWRXPXGXLXXPXRFPPXXPPXGX-------PPWXPXPGXFXRXPGPXLXPLWGXX 845
P + G P L PP PP G PP P PG G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 846 GAXXXXXXXXXGXPXFXVGPXPPPXXGVF 932
G G F GP PPP G+F
Sbjct: 767 GCPPPPPPPPPGG--FKGGPPPPPPPGMF 793
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXP-AXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKG- 596
PP G + G P P P G P PP GG + P GG P G
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGG--LPPISGGPPPPPPPPGGC 768
Query: 597 PXXGXXPXKGXLAGVFPWXPPP 662
P P G G P PPP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.073
Identities = 34/120 (28%), Positives = 39/120 (32%), Gaps = 1/120 (0%)
Frame = +3
Query: 483 PXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPP 662
P PG P G PP + P GG P P G P G G P PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISG---GPPPPPPPP 765
Query: 663 XXA-PXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRXPGPXLXPLWG 839
P P G++ P F P P P + P P + GP WG
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV--IPDYLP-PKKVPKVDGPMRKFPWG 822
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 374 PGPGXGXXGFXCLXXPPXPRGXXVGFWGXXPXPRPXXRXPRXSGGGXXXXPPQGG 538
P P G PP P G G P P P P SGG PP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 33.1 bits (72), Expect = 0.29
Identities = 31/96 (32%), Positives = 32/96 (33%)
Frame = +3
Query: 513 TGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQ 692
TG PP G + P GG P P G P G G P PP P P
Sbjct: 710 TGGPPPPPG--LPPITGGPPPPP-----PPGGLPPITG---GPPPPPPPGGLPPISGGPP 759
Query: 693 VXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXF 800
P G P PP G PP P PG F
Sbjct: 760 PPP--PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 29.9 bits (64), Expect = 2.7
Identities = 36/116 (31%), Positives = 39/116 (33%), Gaps = 2/116 (1%)
Frame = +3
Query: 489 APGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPPXX 668
AP AG + PP G P G P GP P G L + PPP
Sbjct: 695 APSTSAGGSSALPPITGGPPPPP--GLPP---ITGGPPP--PPPPGGLPPITGGPPPPP- 746
Query: 669 APXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXG--XPPWXPXPGXFXRXPGPXLXP 830
P P + G P PP PP G PP P PG F P P P
Sbjct: 747 -PPGGLPPISG---------GPP--PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 7/89 (7%)
Frame = +3
Query: 687 PQVXGWRXPXGXLXXPXRFPPXXPPXGX-------PPWXPXPGXFXRXPGPXLXPLWGXX 845
P + G P L PP PP G PP P PG G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 846 GAXXXXXXXXXGXPXFXVGPXPPPXXGVF 932
G G F GP PPP G+F
Sbjct: 767 GCPPPPPPPPPGG--FKGGPPPPPPPGMF 793
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXP-AXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKG- 596
PP G + G P P P G P PP GG + P GG P G
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGG--LPPISGGPPPPPPPPGGC 768
Query: 597 PXXGXXPXKGXLAGVFPWXPPP 662
P P G G P PPP
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.073
Identities = 34/120 (28%), Positives = 39/120 (32%), Gaps = 1/120 (0%)
Frame = +3
Query: 483 PXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPP 662
P PG P G PP + P GG P P G P G G P PPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISG---GPPPPPPPP 348
Query: 663 XXA-PXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRXPGPXLXPLWG 839
P P G++ P F P P P + P P + GP WG
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV--IPDYLP-PKKVPKVDGPMRKFPWG 405
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 374 PGPGXGXXGFXCLXXPPXPRGXXVGFWGXXPXPRPXXRXPRXSGGGXXXXPPQGG 538
P P G PP P G G P P P P SGG PP GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 33.1 bits (72), Expect = 0.29
Identities = 31/96 (32%), Positives = 32/96 (33%)
Frame = +3
Query: 513 TGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQ 692
TG PP G + P GG P P G P G G P PP P P
Sbjct: 293 TGGPPPPPG--LPPITGGPPPPP-----PPGGLPPITG---GPPPPPPPGGLPPISGGPP 342
Query: 693 VXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXF 800
P G P PP G PP P PG F
Sbjct: 343 PPP--PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 29.9 bits (64), Expect = 2.7
Identities = 36/116 (31%), Positives = 39/116 (33%), Gaps = 2/116 (1%)
Frame = +3
Query: 489 APGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPWXPPPXX 668
AP AG + PP G P G P GP P G L + PPP
Sbjct: 278 APSTSAGGSSALPPITGGPPPPP--GLPP---ITGGPPP--PPPPGGLPPITGGPPPPP- 329
Query: 669 APXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXG--XPPWXPXPGXFXRXPGPXLXP 830
P P + G P PP PP G PP P PG F P P P
Sbjct: 330 -PPGGLPPISG---------GPP--PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 7/89 (7%)
Frame = +3
Query: 687 PQVXGWRXPXGXLXXPXRFPPXXPPXGX-------PPWXPXPGXFXRXPGPXLXPLWGXX 845
P + G P L PP PP G PP P PG G P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 846 GAXXXXXXXXXGXPXFXVGPXPPPXXGVF 932
G G F GP PPP G+F
Sbjct: 350 GCPPPPPPPPPGG--FKGGPPPPPPPGMF 376
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Frame = +3
Query: 423 PPXGXXXLXFGXPSRXP-AXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKG- 596
PP G + G P P P G P PP GG + P GG P G
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPP----PPPPPGG--LPPISGGPPPPPPPPGGC 351
Query: 597 PXXGXXPXKGXLAGVFPWXPPP 662
P P G G P PPP
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPP 373
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.22
Identities = 37/126 (29%), Positives = 39/126 (30%), Gaps = 4/126 (3%)
Frame = -1
Query: 847 PXXPQRGXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGA 668
P P G R GP PG Q G P G R G P G + P GA
Sbjct: 148 PCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPG----PPGPKGP-------RGA 196
Query: 667 XXGGGXXGK--TPANXP--FXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAG 500
G G P N + G GP R G P G G P P G
Sbjct: 197 PGNSGRAGAPGQPGNDAHGYGGGVGAPGPAGPR---GAPGPAGHPGSSGGGRPGPAGPKG 253
Query: 499 XPGAXG 482
PG G
Sbjct: 254 APGQPG 259
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.22
Identities = 35/122 (28%), Positives = 36/122 (29%)
Frame = -1
Query: 847 PXXPQRGXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGA 668
P P G GP PG G P G G P G P GA
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNP--GSPAGPSGPGPAGPPGPAGPAG-NDGAPGA 202
Query: 667 XXGGGXXGKTPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGA 488
G G G + P G GP G G P GG P P G PGA
Sbjct: 203 PGGPGEPGASEQGGP--GEPGPAGP------PGPAGPAGNDGAPGTGGPGPAGPKGPPGA 254
Query: 487 XG 482
G
Sbjct: 255 AG 256
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 33.5 bits (73), Expect = 0.22
Identities = 35/122 (28%), Positives = 36/122 (29%)
Frame = -1
Query: 847 PXXPQRGXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGA 668
P P G GP PG G P G G P G P GA
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNP--GSPAGPSGPGPAGPPGPAGPAG-NDGAPGA 202
Query: 667 XXGGGXXGKTPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGA 488
G G G + P G GP G G P GG P P G PGA
Sbjct: 203 PGGPGEPGASEQGGP--GEPGPAGP------PGPAGPAGNDGAPGTGGPGPAGPKGPPGA 254
Query: 487 XG 482
G
Sbjct: 255 AG 256
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 597 PXXGXXPXKGXLAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXP 773
P P K G P PPP P P+ R P P R PP PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 33.5 bits (73), Expect = 0.22
Identities = 35/122 (28%), Positives = 36/122 (29%)
Frame = -1
Query: 847 PXXPQRGXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGA 668
P P G GP PG G P G G P G P GA
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNP--GSPAGPSGPGPAGPPGPAGPAG-NDGAPGA 202
Query: 667 XXGGGXXGKTPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGA 488
G G G + P G GP G G P GG P P G PGA
Sbjct: 203 PGGPGEPGASEQGGP--GEPGPAGP------PGPAGPAGNDGAPGTGGPGPAGPKGPPGA 254
Query: 487 XG 482
G
Sbjct: 255 AG 256
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.22
Identities = 35/122 (28%), Positives = 36/122 (29%)
Frame = -1
Query: 847 PXXPQRGXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGA 668
P P G GP PG G P G G P G P GA
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNP--GSPAGPSGPGPAGPPGPAGPAG-NDGAPGA 202
Query: 667 XXGGGXXGKTPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGA 488
G G G + P G GP G G P GG P P G PGA
Sbjct: 203 PGGPGEPGASEQGGP--GEPGPAGP------PGPAGPAGNDGAPGTGGPGPAGPKGPPGA 254
Query: 487 XG 482
G
Sbjct: 255 AG 256
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 33.1 bits (72), Expect = 0.29
Identities = 39/127 (30%), Positives = 41/127 (32%), Gaps = 5/127 (3%)
Frame = +3
Query: 453 GXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGP-XXGXXPXKGX 629
G PS P+ P AP P PP G P G P GP G P
Sbjct: 202 GGPSSAPSAYPGAPQVPQAPNSFIPP-GTGGFPP---GQPTAGSFPPGPQVPGSYPSGPA 257
Query: 630 LAGVFPWXPP--PXXAPXKXXPQVXGWRXP-XGXLXXPXRFPPXXPPXGXPPWXPXPGXF 800
P P P A P + G P G P FPP P G P PG F
Sbjct: 258 DIPQGPGMPRAFPPGASAPVAPGMPGAFPPGQGGPGMPGSFPPGAPGPGGP---GMPGSF 314
Query: 801 -XRXPGP 818
PGP
Sbjct: 315 APGAPGP 321
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +3
Query: 645 PWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRXPG 815
P PPP P G P G P +PP P G PP P PG + PG
Sbjct: 130 PSGPPPPSMAYGMPPMPSGMMPPRGM---PGAYPP---PRGYPP-APAPGVYMPPPG 179
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +3
Query: 645 PWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRXPG 815
P PPP P G P G P +PP P G PP P PG + PG
Sbjct: 130 PSGPPPPSMAYGMPPMPSGMMPPRGM---PGAYPP---PRGYPP-APAPGVYMPPPG 179
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.5 bits (68), Expect = 0.90
Identities = 31/116 (26%), Positives = 34/116 (29%)
Frame = -1
Query: 829 GXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGX 650
G GPG G G P GG G P G +P T GA G
Sbjct: 181 GPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAG--NPGT-----DGAPGNPGA 233
Query: 649 XGKTPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGAXG 482
G+ G GP G P G + P G P G PG G
Sbjct: 234 PGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDAGPDGAPGNAG 289
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/78 (30%), Positives = 26/78 (33%)
Frame = -1
Query: 829 GXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGX 650
G G G G G GG GGF GG G G + G G GGG
Sbjct: 163 GGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGG--GGMGGGGYGGGGD 220
Query: 649 XGKTPANXPFXGXXPFXG 596
G P+ G P G
Sbjct: 221 GGYGPSGGYGGGYGPGGG 238
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +3
Query: 645 PWXPPPXXAPXKXXPQVXGWRX--PXGXLXXPXRF-PPXXPPXGXPPWXPXPGXF 800
P PP P + G+ P G + P F PP P G PP P P F
Sbjct: 714 PQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPPPAGF 768
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 654 PPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPP 776
PP P WR P P +P PP G PP
Sbjct: 79 PPGQHHPQHPGMPPMEWRPPGAEYQMPPGYPAGYPPYGMPP 119
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/64 (35%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +3
Query: 645 PWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXP--PXGXPPWXPXPGXFXRXPGP 818
P P P P K P G G P R PP P P PPW P P PGP
Sbjct: 102 PGPPGPAGTPGK--PGRPGKPGAPGLPGNPGR-PPQQPCEPITPPPWKPCPQGPPGPPGP 158
Query: 819 XLXP 830
P
Sbjct: 159 PGPP 162
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -1
Query: 790 GXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGXXG 644
G G G GG GG R G + P G G G GGG G
Sbjct: 124 GWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRG 172
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +3
Query: 471 PAXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPW 650
P P AP P G PP+GG P G P G P G P
Sbjct: 765 PVPRP-APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGM-YPPLIPTRPG--PG 820
Query: 651 XPPPXXAPXK 680
PPP AP +
Sbjct: 821 GPPPNMAPPR 830
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.1
Identities = 30/115 (26%), Positives = 35/115 (30%), Gaps = 3/115 (2%)
Frame = +3
Query: 459 PSRXPAXXPXAPGX---PAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGX 629
PS P+ P P P+G + P SP P + P P G
Sbjct: 172 PSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGP 231
Query: 630 LAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPG 794
+ P P P P R P G P R PP P PP PG
Sbjct: 232 VDPSDE--PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP---GPPTRRPPG 281
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +3
Query: 471 PAXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKGPXXGXXPXKGXLAGVFPW 650
P P AP P G PP+GG P G P G P G P
Sbjct: 765 PVPRP-APAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGM-YPPLIPTRPG--PG 820
Query: 651 XPPPXXAPXK 680
PPP AP +
Sbjct: 821 GPPPNMAPPR 830
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -2
Query: 537 PPWGGX-NXXPPPXXRGXRXXGRGNGXXPQXPTXXPRGXGGXFKQXKPXXPXPGPGK 370
PP GG + PPP RG GRG P P RG GG P P G G+
Sbjct: 773 PPRGGMHHMPPPPSFRG----GRGGHGGPPPPHFDRRGGGG-----PPFRPENGRGR 820
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +3
Query: 630 LAGVF--PWXPPPXX-APXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXF 800
+A +F P PPP +P P P P FPP P P P PG
Sbjct: 1211 MASIFQSPTMPPPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPPTTPT--YPGMTPRPGPN 1268
Query: 801 XRXPGP 818
PGP
Sbjct: 1269 FGPPGP 1274
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +3
Query: 630 LAGVF--PWXPPPXX-APXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXF 800
+A +F P PPP +P P P P FPP P P P PG
Sbjct: 1211 MASIFQSPTMPPPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPPTTPT--YPGMTPRPGPN 1268
Query: 801 XRXPGP 818
PGP
Sbjct: 1269 FGPPGP 1274
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/90 (27%), Positives = 27/90 (30%)
Frame = +3
Query: 657 PPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRXPGPXLXPLW 836
PP P PQ + G + P PP G P G F GP PL
Sbjct: 101 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGP--PPLM 158
Query: 837 GXXGAXXXXXXXXXGXPXFXVGPXPPPXXG 926
G G G P G PP G
Sbjct: 159 GGGGDPRGPPGGMGGPPGHG-GMGGPPGHG 187
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 829 GXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXG 731
G G G PG G QGG P G GG G
Sbjct: 172 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPG 204
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/90 (27%), Positives = 27/90 (30%)
Frame = +3
Query: 657 PPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRXPGPXLXPLW 836
PP P PQ + G + P PP G P G F GP PL
Sbjct: 381 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGP--PPLM 438
Query: 837 GXXGAXXXXXXXXXGXPXFXVGPXPPPXXG 926
G G G P G PP G
Sbjct: 439 GGGGDPRGPPGGMGGPPGHG-GMGGPPGHG 467
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 829 GXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXG 731
G G G PG G QGG P G GG G
Sbjct: 452 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPG 484
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +3
Query: 630 LAGVF--PWXPPPXX-APXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXF 800
+A +F P PPP +P P P P FPP P P P PG
Sbjct: 1211 MASIFQSPTMPPPHTPSPFSAGPMSHHPMGPPAYPGTPGSFPPTTPT--YPGMTPRPGPN 1268
Query: 801 XRXPGP 818
PGP
Sbjct: 1269 FGPPGP 1274
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 2/72 (2%)
Frame = -3
Query: 554 GGNXXTPLGGGXTXXPRRXXGGXGXXGGXTGXXPKXQ--PPXPXGXAXXLSXKNXPXPPP 381
GG GGG GG G GG P PP P G P P
Sbjct: 102 GGGYGGGHGGGHGGAVGGGYGGGGGGGGGCQCSPSSNTCPPGPRGPPGQAGLDGLPGAPG 161
Query: 380 DPXKKKXAXGGG 345
P A G
Sbjct: 162 QPGSNGGAGSNG 173
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 16/66 (24%), Positives = 20/66 (30%)
Frame = -2
Query: 570 GXPRIXGKPXYPPWGGXNXXPPPXXRGXRXXGRGNGXXPQXPTXXPRGXGGXFKQXKPXX 391
G P G+P P +GG P G P P + G + P
Sbjct: 200 GRPGNDGQPGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPG 259
Query: 390 PXPGPG 373
P PG
Sbjct: 260 PAGPPG 265
Score = 23.4 bits (48), Expect(2) = 4.4
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = -2
Query: 315 PXXPKXPPXXPKSXXFPPXXXGXGPNXP 232
P P PP P + P G GP P
Sbjct: 257 PPGPAGPPGPPGNNGAPGGGYGVGPPGP 284
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.1 bits (62), Expect = 4.8
Identities = 30/113 (26%), Positives = 33/113 (29%), Gaps = 1/113 (0%)
Frame = -1
Query: 817 GPGXRXXXPGXGXQGGXPXG-GFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGXXGK 641
GP PG G P G GG P G P G+ G G
Sbjct: 177 GPPGPSGAPGQKGPSGAPGAPGQSGGASLPGPPGPAGPPGPS----GQPGSNGNAGAPGA 232
Query: 640 TPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGAXG 482
G GP G P G++ GG P AG PGA G
Sbjct: 233 PGQVVDVPGTPGPAGPPGPPGPAGAPGQPGQSGSAQPGGPGPQGDAGAPGAPG 285
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 35/133 (26%), Positives = 39/133 (29%), Gaps = 1/133 (0%)
Frame = -1
Query: 817 GPGXRXXXPGXGXQGGXPXG-GFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGXXGK 641
GP PG G P G GG P G P G+ G G
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPA----GQPGSNGNAGAPGA 231
Query: 640 TPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGAXGXWAGXRX 461
G GP G P G+ GG P AG PGA G A +
Sbjct: 232 PGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPG--APGQA 289
Query: 460 GXPKXNXXSPXGG 422
G P + S G
Sbjct: 290 GAPGQDGESGSEG 302
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 35/133 (26%), Positives = 39/133 (29%), Gaps = 1/133 (0%)
Frame = -1
Query: 817 GPGXRXXXPGXGXQGGXPXG-GFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGXXGK 641
GP PG G P G GG P G P G+ G G
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPA----GQPGSNGNAGAPGA 231
Query: 640 TPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGAXGXWAGXRX 461
G GP G P G+ GG P AG PGA G A +
Sbjct: 232 PGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPG--APGQA 289
Query: 460 GXPKXNXXSPXGG 422
G P + S G
Sbjct: 290 GAPGQDGESGSEG 302
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +3
Query: 738 RFPPXXPPXGX-----PPWXPXPGXFXRXPGPXLXPLWGXXGAXXXXXXXXXGXPXFXVG 902
++PP PP PP P PG R P P +W G P
Sbjct: 259 QYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW--PPPPPPPPGRTPGPPGMPGM 316
Query: 903 PXPPP 917
P PPP
Sbjct: 317 PPPPP 321
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 374 PGPGXGXXGFXCLXXPPXP-RGXXVGFWGXXPXPRPXXRXPRXSGGGXXXXPPQGGXSG 547
PG G G + PP P R G G P P P R P GG PP+ +G
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP---GGMPPPPPPRYPSAG 359
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 35/133 (26%), Positives = 39/133 (29%), Gaps = 1/133 (0%)
Frame = -1
Query: 817 GPGXRXXXPGXGXQGGXPXG-GFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGXXGK 641
GP PG G P G GG P G P G+ G G
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPA----GQPGSNGNAGAPGA 231
Query: 640 TPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGAXGXWAGXRX 461
G GP G P G+ GG P AG PGA G A +
Sbjct: 232 PGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPG--APGQA 289
Query: 460 GXPKXNXXSPXGG 422
G P + S G
Sbjct: 290 GAPGQDGESGSEG 302
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 35/133 (26%), Positives = 39/133 (29%), Gaps = 1/133 (0%)
Frame = -1
Query: 817 GPGXRXXXPGXGXQGGXPXG-GFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGXXGK 641
GP PG G P G GG P G P G+ G G
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPA----GQPGSNGNAGAPGA 231
Query: 640 TPANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGAXGXWAGXRX 461
G GP G P G+ GG P AG PGA G A +
Sbjct: 232 PGQVVDVPGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPG--APGQA 289
Query: 460 GXPKXNXXSPXGG 422
G P + S G
Sbjct: 290 GAPGQDGESGSEG 302
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.8
Identities = 32/122 (26%), Positives = 35/122 (28%), Gaps = 1/122 (0%)
Frame = +3
Query: 453 GXPSRXPAXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXPXKXLXXKG-PXXGXXPXKGX 629
G P R P PG PPK P P KG P
Sbjct: 126 GAPGRP--GNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPGPQGDAGTSG 183
Query: 630 LAGVFPWXPPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXPGXFXRX 809
GV PP + + P V G + P G P PP PP P P
Sbjct: 184 QDGVPGLPGPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPP--GPPGPPGPQGPPGP 241
Query: 810 PG 815
PG
Sbjct: 242 PG 243
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +2
Query: 365 FFXPGPGXGXXGFXCLXXPPXPRGXXVGFWGXXPXPR-PXXRXPRXSGGGXXXXPPQGGX 541
F P G G G PP P G G G P+ P P GGG PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGG--GGLALPQLPPLSLPSLGGGGGCCPPPAPAC 74
Query: 542 SG 547
G
Sbjct: 75 GG 76
>U39745-4|AAA80446.1| 325|Caenorhabditis elegans Collagen protein
173 protein.
Length = 325
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = -3
Query: 554 GGNXXTPLGGGXTXXPRRXXGGXGXXG--GXTGXXPKXQPPXPXGXAXXLSXKNXPXPPP 381
GG P+ PR G G G G G K PP P G P P
Sbjct: 237 GGPDGIPMEKKSPPGPRGPPGPAGPDGPQGPEGRSGKQGPPGPTGQEGEEGVIGEPGKPG 296
Query: 380 DPXKKKXAXGGG 345
+P K A G
Sbjct: 297 EPGKSGAAGARG 308
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +3
Query: 738 RFPPXXPPXGX-----PPWXPXPGXFXRXPGPXLXPLWGXXGAXXXXXXXXXGXPXFXVG 902
++PP PP PP P PG R P P +W G P
Sbjct: 269 QYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW--PPPPPPPPGRTPGPPGMPGM 326
Query: 903 PXPPP 917
P PPP
Sbjct: 327 PPPPP 331
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 374 PGPGXGXXGFXCLXXPPXP-RGXXVGFWGXXPXPRPXXRXPRXSGGGXXXXPPQGGXSG 547
PG G G + PP P R G G P P P R P GG PP+ +G
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP---GGMPPPPPPRYPSAG 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +2
Query: 419 PPXPRGXXVGFWGXXPXPR----PXXRXPRXSGGGXXXXPPQGGXSGFPXXRGXPXEXPX 586
PP P G G P PR P PR S PPQ G S P G P P
Sbjct: 281 PPPPAG------GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
Query: 587 XQR 595
+R
Sbjct: 335 QKR 337
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -1
Query: 565 PPXXGETXXPPLGGXXPVXPAGXPGAXGXWAGXRXGXPKXNXXSPXGGRXX*AXKTXPXX 386
PP G PP GG P AG P R P + P G T
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPP---PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Query: 385 PRTRXKKXKP 356
P R K+ P
Sbjct: 331 PPPRQKRQAP 340
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +2
Query: 419 PPXPRGXXVGFWGXXPXPR----PXXRXPRXSGGGXXXXPPQGGXSGFPXXRGXPXEXPX 586
PP P G G P PR P PR S PPQ G S P G P P
Sbjct: 302 PPPPAG------GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
Query: 587 XQR 595
+R
Sbjct: 356 QKR 358
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -1
Query: 565 PPXXGETXXPPLGGXXPVXPAGXPGAXGXWAGXRXGXPKXNXXSPXGGRXX*AXKTXPXX 386
PP G PP GG P AG P R P + P G T
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPP---PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Query: 385 PRTRXKKXKP 356
P R K+ P
Sbjct: 352 PPPRQKRQAP 361
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Frame = +2
Query: 419 PPXPRGXXVGFWGXXPXPR----PXXRXPRXSGGGXXXXPPQGGXSGFPXXRGXPXEXPX 586
PP P G G P PR P PR S PPQ G S P G P P
Sbjct: 287 PPPPAG------GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
Query: 587 XQR 595
+R
Sbjct: 341 QKR 343
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -1
Query: 565 PPXXGETXXPPLGGXXPVXPAGXPGAXGXWAGXRXGXPKXNXXSPXGGRXX*AXKTXPXX 386
PP G PP GG P AG P R P + P G T
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPP---PPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Query: 385 PRTRXKKXKP 356
P R K+ P
Sbjct: 337 PPPRQKRQAP 346
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/112 (25%), Positives = 32/112 (28%)
Frame = -1
Query: 817 GPGXRXXXPGXGXQGGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGXXGKT 638
GP PG G P G G P G P G+ G G
Sbjct: 173 GPPGPSGAPGQKGPSGAP--GVPGQTGGASLPGPPGPAGPPG-PSGQPGSNGNAGAPGAP 229
Query: 637 PANXPFXGXXPFXGPLXXRXFXGXPPXXGETXXPPLGGXXPVXPAGXPGAXG 482
G GP G P G++ GG P AG PGA G
Sbjct: 230 GQVVDVPGTPGPAGPPGPPGPAGAPGQPGQSGSGQPGGPGPQGDAGAPGAPG 281
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 453 GXPS-RXPAXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXP 572
G P R P+ P A G PAG G P+GG V+P G P
Sbjct: 171 GSPGPRGPSGNPGADG-PAGQLG---PQGGSNVAPSPAGEP 207
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 453 GXPS-RXPAXXPXAPGXPAGXTGXXPPKGGXXVSPXXGGXP 572
G P R P+ P A G PAG G P+GG V+P G P
Sbjct: 224 GSPGPRGPSGNPGADG-PAGQLG---PQGGSNVAPSPAGEP 260
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 28.7 bits (61), Expect = 6.3
Identities = 32/102 (31%), Positives = 33/102 (32%), Gaps = 4/102 (3%)
Frame = -1
Query: 775 GGXPXGGFXGGKRXGXFKXPXGXRHPXT*GXXXXGAXXGGGXXGKTPANXPFXGXXPFXG 596
GG GG G+ G F P G A G G G P G F
Sbjct: 34 GGYGRGGSSSGRGRG-FNGPPGGAGSF---FGVPPAARGRGGPGMAPPGFAGRGRG-FAT 88
Query: 595 PLXXRXFX----GXPPXXGETXXPPLGGXXPVXPAGXPGAXG 482
P F G PP G PP G V P G PGA G
Sbjct: 89 PGMSSGFAPRGRGMPPGRGG-YMPPYRGGYGVAPNGGPGAYG 129
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 450 FGXPSRXPAXXPXAPGXPAGXTGXXPP-KGGXXVSPXXG 563
F P P G P G G PP +GG V+P G
Sbjct: 86 FATPGMSSGFAPRGRGMPPGRGGYMPPYRGGYGVAPNGG 124
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 654 PPPXXAPXKXXPQVXGWRXPXGXLXXPXRFPPXXPPXGXPPWXPXP 791
PPP P WR P P PP PP P P
Sbjct: 50 PPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEPQQDQP 95
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 450 FGXPSRXPAXXPXAPGXPAGXTGXXPP-KGGXXVSPXXG 563
F P P G P G G PP +GG V+P G
Sbjct: 77 FATPGMSSGFAPRGRGMPPGRGGYMPPYRGGYGVAPNGG 115
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 450 FGXPSRXPAXXPXAPGXPAGXTGXXPP-KGGXXVSPXXG 563
F P P G P G G PP +GG V+P G
Sbjct: 77 FATPGMSSGFAPRGRGMPPGRGGYMPPYRGGYGVAPNGG 115
>AC025724-6|AAG23373.2| 158|Caenorhabditis elegans Hypothetical
protein Y67D8C.7 protein.
Length = 158
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 835 QRGXRXGPGXRXXXPGXGXQGGXPXGGFXGGKRXG 731
+RG G G + G G GG GG GG + G
Sbjct: 81 RRGYSQGGGQKKSKYGGGQSGGNKYGGGGGGSKYG 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,759,966
Number of Sequences: 27780
Number of extensions: 228950
Number of successful extensions: 1460
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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