Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L11
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1099 + 34525714-34526775                                         30   2.9  
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597...    29   3.8  
01_06_0265 - 28011181-28011240,28011298-28011375,28011493-280118...    28   8.9  

>01_06_1099 + 34525714-34526775
          Length = 353

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +2

Query: 647 NKMEDLRGKKSCHSSYGTFSGLDAPLYYLINKRIIKPDQCIKNXGDSSPAVHVCQA 814
           NK+ED+R    C +    FSGL  P   L++   +K D+ +   GD+  A+++  A
Sbjct: 31  NKLEDVRSLGRCAAVSKRFSGL-VP---LVSDVYVKIDRVVATDGDADDALNLSSA 82


>09_06_0204 -
           21559024-21559287,21559445-21559567,21559665-21559718,
           21559800-21560721,21560803-21561212,21561284-21561408,
           21561524-21561571,21561668-21561789,21562008-21562099,
           21562242-21562429,21562582-21562696,21562780-21562863,
           21562994-21563087,21563393-21563510,21563805-21563930,
           21564002-21564074,21564209-21564296,21564674-21564744,
           21564839-21564918,21565004-21565065,21565169-21565310,
           21565410-21565510,21565600-21565644,21565725-21565789,
           21566088-21566163,21566246-21566300,21566416-21566773
          Length = 1366

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -2

Query: 709 STESAVRTVTRFLSS*IFHLIEGCSFFDDSHSVVRSFLFS--VYLVEDRVQDVSL 551
           S++ + +    FL+     + EG  F DD   VV SF+FS  V+   +R+ DV +
Sbjct: 629 SSQESAKGGAAFLAVCRGKVSEGIDFSDDKARVVVSFVFSSYVFYAPERINDVQV 683


>01_06_0265 -
           28011181-28011240,28011298-28011375,28011493-28011802,
           28012913-28013533,28013733-28013818
          Length = 384

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -1

Query: 884 TAVTSALFLNDVHHHRWXVLXLSTPGKHEPPEKNHXSS 771
           T   +A  + D HHHR  V   S  G    P+K H S+
Sbjct: 221 TRSAAAAAVGDAHHHRSAVEERSGGGYKRSPDKAHKSA 258


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,027,290
Number of Sequences: 37544
Number of extensions: 444161
Number of successful extensions: 1032
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)