Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L10
         (875 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R984 Cluster: Thioredoxin, putative; n=6; Plasmodium|...    38   0.33 
UniRef50_Q4XW29 Cluster: Putative uncharacterized protein; n=5; ...    33   9.5  

>UniRef50_Q7R984 Cluster: Thioredoxin, putative; n=6;
           Plasmodium|Rep: Thioredoxin, putative - Plasmodium
           yoelii yoelii
          Length = 438

 Score = 37.9 bits (84), Expect = 0.33
 Identities = 20/72 (27%), Positives = 39/72 (54%)
 Frame = -3

Query: 312 IMISYSTK*LHVRIKGKYHISELKLGYVIVYCTYSYINNLIPTNIKFKHTSYVYVWTIFY 133
           I IS+S K ++  +KG Y    +K   + +    S ++NL+P  I+  H  Y+Y++  F+
Sbjct: 362 IAISFS-KNVYSILKGNYSEQSIKNFVIQMMTGKSSVDNLVPFKIRLLHI-YIYIYIYFF 419

Query: 132 KYQYILSNYMEQ 97
                 +NY+++
Sbjct: 420 YASIFFNNYLQK 431


>UniRef50_Q4XW29 Cluster: Putative uncharacterized protein; n=5;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium chabaudi
          Length = 1460

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +1

Query: 34   LRFTSARLRCTNVNIFGSLGLLFHIITKYVLIFIENCPNIHV*CMFKLNVSRYKII 201
            L+ TS      N N+  ++  L+   TKYV I++EN  NI     F LN + + II
Sbjct: 996  LKLTSKFFNKKNENVIKTISSLYICTTKYVEIYLENLKNIDT-PFFDLNNTCFDII 1050


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,805,550
Number of Sequences: 1657284
Number of extensions: 12054619
Number of successful extensions: 23054
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23029
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)