Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L10
         (875 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    27   0.26 
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.4  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   3.1  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   7.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 520 CDMD*LKYFSCYFRCITTYLLVLLYHLQICDEGI 621
           CD++ ++YF    RC+ T  L+  YH+   +  I
Sbjct: 377 CDINSIQYFCLMARCLNT--LIFYYHISTYEYSI 408


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = -2

Query: 652 FLMFSINLAIKCLH--HKF-ASDRVI 584
           F  F +NLA+ CLH  H   A+D+VI
Sbjct: 2   FAKFWVNLALFCLHVQHSHGATDKVI 27


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 649 LMFSINLAIKCLHHKFASDRVIP 581
           ++F++ L + C H  F  + VIP
Sbjct: 1   MLFTVFLVLTCAHVVFLEEYVIP 23


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 443 IQPMIIHVKIVLFLYHIMCSEKTI 514
           IQ + +  + + FLYH++ +E  +
Sbjct: 134 IQTLKLAARYIDFLYHVLSNENAL 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,478
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)