Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_L09
(898 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O02394 Cluster: Dribble protein; n=4; Fungi/Metazoa gro... 178 2e-43
UniRef50_A0FIK6 Cluster: HRB2 variant B; n=15; Coelomata|Rep: HR... 158 2e-37
UniRef50_Q13601 Cluster: KRR1 small subunit processome component... 158 2e-37
UniRef50_O16311 Cluster: Putative uncharacterized protein; n=2; ... 143 5e-33
UniRef50_Q86E68 Cluster: Clone ZZD933 mRNA sequence; n=1; Schist... 131 2e-29
UniRef50_A0E352 Cluster: Chromosome undetermined scaffold_76, wh... 120 5e-26
UniRef50_P25586 Cluster: Ribosomal RNA assembly protein KRR1; n=... 120 7e-26
UniRef50_Q54UU6 Cluster: Putative uncharacterized protein; n=1; ... 118 2e-25
UniRef50_Q587A1 Cluster: Ribosomal RNA assembly protein, putativ... 116 1e-24
UniRef50_Q5KHS1 Cluster: RRNA processing-related protein, putati... 109 7e-23
UniRef50_Q7QYA4 Cluster: GLP_387_52551_53537; n=2; Giardia intes... 104 3e-21
UniRef50_Q5N8D1 Cluster: Rev protein (42.9 kD)-like; n=9; Magnol... 95 6e-20
UniRef50_A2EWA3 Cluster: Ribosomal RNA assembly protein mis3, pu... 93 7e-18
UniRef50_Q8SVW2 Cluster: Putative uncharacterized protein ECU04_... 87 6e-16
UniRef50_Q9AW78 Cluster: Rev interacting protein Rip-1-like prot... 74 6e-12
UniRef50_Q17XK7 Cluster: Putative lipopolysaccharide biosynthesi... 33 7.5
UniRef50_Q0S732 Cluster: Acyl-[acyl-carrier protein] desaturase;... 33 7.5
UniRef50_A2F616 Cluster: Putative uncharacterized protein; n=7; ... 33 7.5
UniRef50_Q6L2G6 Cluster: Putative RNA-binding protein; n=1; Picr... 33 9.9
>UniRef50_O02394 Cluster: Dribble protein; n=4; Fungi/Metazoa
group|Rep: Dribble protein - Drosophila melanogaster
(Fruit fly)
Length = 327
Score = 178 bits (433), Expect = 2e-43
Identities = 77/104 (74%), Positives = 92/104 (88%)
Frame = +2
Query: 179 TNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVA 358
T VDNAW+MKIP F +DNPHG++EES FATLFPKYRE+YLKE WPLV++ L+EHH+ A
Sbjct: 13 TEPVDNAWSMKIPAFRQEDNPHGMVEESSFATLFPKYRERYLKEVWPLVEQCLAEHHLKA 72
Query: 359 ELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
ELDL+EGS+ VKT+RKTWDPYIIIKARD +KL++RSVPFEQA R
Sbjct: 73 ELDLMEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKR 116
Score = 113 bits (273), Expect = 4e-24
Identities = 58/99 (58%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ +L KK+ F TLKSIELLT+CYVLVQGNTVSA+GPYKGL QVR
Sbjct: 126 IIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYKGLQQVR 185
Query: 700 RIVEDTMKNIHPMYNIKSLMIKREX*K-TQAKNESWDRF 813
IV +TM N+HP+YNIK+LMIKRE K + NE W RF
Sbjct: 186 DIVLETMNNVHPIYNIKALMIKRELMKDPRLANEDWSRF 224
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
VL D+IGCDIIKI + V KKE F+KRRQRLIGP G +K
Sbjct: 117 VLQDDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLK 155
>UniRef50_A0FIK6 Cluster: HRB2 variant B; n=15; Coelomata|Rep: HRB2
variant B - Homo sapiens (Human)
Length = 324
Score = 158 bits (383), Expect = 2e-37
Identities = 75/110 (68%), Positives = 88/110 (80%)
Frame = +2
Query: 161 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 340
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Score = 87.8 bits (208), Expect = 3e-16
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRGQRLVGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 700 RIVEDTMKNIHPMYNIK 750
++V DTMKNIHP+YNIK
Sbjct: 204 KVVLDTMKNIHPIYNIK 220
Score = 55.6 bits (128), Expect = 2e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CDIIKI S VR KE F+KR QRL+GP+G +K
Sbjct: 135 ILQDDVACDIIKIGSLVRNKERFVKRGQRLVGPKGSTLK 173
>UniRef50_Q13601 Cluster: KRR1 small subunit processome component
homolog; n=44; Eukaryota|Rep: KRR1 small subunit
processome component homolog - Homo sapiens (Human)
Length = 381
Score = 158 bits (383), Expect = 2e-37
Identities = 75/110 (68%), Positives = 88/110 (80%)
Frame = +2
Query: 161 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 340
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Score = 110 bits (264), Expect = 5e-23
Identities = 52/99 (52%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 700 RIVEDTMKNIHPMYNIKSLMIKREX*K-TQAKNESWDRF 813
++V DTMKNIHP+YNIKSLMIKRE K ++ +++SW+RF
Sbjct: 204 KVVLDTMKNIHPIYNIKSLMIKRELAKDSELRSQSWERF 242
Score = 58.8 bits (136), Expect = 2e-07
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CDIIKI S VR KE F+KRRQRLIGP+G +K
Sbjct: 135 ILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLK 173
>UniRef50_O16311 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 370
Score = 143 bits (347), Expect = 5e-33
Identities = 63/100 (63%), Positives = 83/100 (83%)
Frame = +2
Query: 191 DNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDL 370
D W I F+ +DNP+GLL+ES F++LFPKYRE+Y+KE WPL++K L EH + A+LDL
Sbjct: 41 DAEW-WDINTFSKEDNPNGLLQESSFSSLFPKYREKYIKESWPLIEKALGEHFLKADLDL 99
Query: 371 IEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
+EG++ V+TTRKTWDPYII+KAR+ +KLLSRSVP+EQA R
Sbjct: 100 LEGTMCVRTTRKTWDPYIIMKAREVIKLLSRSVPYEQAIR 139
Score = 101 bits (241), Expect = 3e-20
Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 1/114 (0%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ + K+ F TLK++ELLT+CYV VQG TV AVGP GL Q+
Sbjct: 149 IIKISSMVRNKERFVKRRARLIGNDGATLKALELLTQCYVCVQGGTVCAVGPLAGLKQIN 208
Query: 700 RIVEDTMKNIHPMYNIKSLMIKREX*KT-QAKNESWDRFCXHXEQNVPGSTKXK 858
+IV D MKNIHP+YNIK++MIKRE K + K+ +WD + + + V +T K
Sbjct: 209 QIVTDCMKNIHPIYNIKTMMIKRELSKNDELKDANWDAYLPNYRKKVQSATTTK 262
Score = 53.6 bits (123), Expect = 7e-06
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 486 LXVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+ VL+DEI C+IIKI+S VR KE F+KRR RLIG G +K
Sbjct: 138 IRVLEDEIYCEIIKISSMVRNKERFVKRRARLIGNDGATLK 178
>UniRef50_Q86E68 Cluster: Clone ZZD933 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD933 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 343
Score = 131 bits (317), Expect = 2e-29
Identities = 60/113 (53%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Frame = +2
Query: 155 KTNMEVEETNSVDNAWAMKIPKFTPDDNPHG-LLEESKFATLFPKYREQYLKECWPLVQK 331
K N E+ E+ V+ K PKF P+DNPHG L S + TLFPKYRE+YL E WP +++
Sbjct: 28 KKNDEINESQYVEVPKDWKEPKFNPEDNPHGRLFASSSYLTLFPKYREKYLSEIWPALKR 87
Query: 332 ILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
I+ EHHI E++L E ++ V+TT +T+DP+II+KARD ++LL+RSVP EQA R
Sbjct: 88 IMMEHHIRVEINLAESTMEVRTTPRTFDPFIILKARDVIRLLARSVPLEQAVR 140
Score = 76.2 bits (179), Expect = 1e-12
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Frame = +1
Query: 601 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTM-KNIHPMYNIKSLMIKREX* 777
TLK++EL T CY++VQG TVS VG Y L +VR+IV+ + +N+HP Y+IK L+I ++
Sbjct: 175 TLKALELSTNCYIVVQGKTVSVVGRYNDLKEVRKIVQGCIYENVHPAYSIKRLLIIKKLS 234
Query: 778 KTQAK-NESWDRFCXHXEQNVPGSTKXKP 861
K N SWDRF ++ + S + KP
Sbjct: 235 MDPTKQNMSWDRFLPKMKKKIL-SRRRKP 262
Score = 39.9 bits (89), Expect = 0.086
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3
Query: 474 LNKPLXVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
L + + VLDDE DII+IN + +E F+KRR RLIG G +K
Sbjct: 135 LEQAVRVLDDETFADIIEIN--MTNRERFVKRRNRLIGHDGETLK 177
>UniRef50_A0E352 Cluster: Chromosome undetermined scaffold_76, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_76,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 348
Score = 120 bits (289), Expect = 5e-26
Identities = 56/94 (59%), Positives = 73/94 (77%)
Frame = +2
Query: 209 KIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLT 388
KIP+ P + LL ES FATLFPKYRE+Y++E + +V+K + +H I AEL+L+EGSLT
Sbjct: 30 KIPEIQPGEMNGSLLAESSFATLFPKYREKYIQEVFGMVKKSMKDHGIRAELNLMEGSLT 89
Query: 389 VKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
VKTT KTWDP+ I+KARD +KLL+RSVP +Q R
Sbjct: 90 VKTTNKTWDPWAIMKARDIIKLLARSVPVQQCLR 123
Score = 101 bits (242), Expect = 2e-20
Identities = 44/78 (56%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Frame = +1
Query: 601 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKREX*K 780
TLK++ELLT+CY++VQG+TVS +G +K L VR++V DTM+N+HP+Y+IK LMIKRE K
Sbjct: 160 TLKALELLTDCYIMVQGSTVSVIGNWKNLKTVRKVVVDTMQNVHPIYSIKELMIKRELSK 219
Query: 781 TQ-AKNESWDRFCXHXEQ 831
+ +NE+WDRF H ++
Sbjct: 220 DENMQNENWDRFLPHFKK 237
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 486 LXVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
L +L+D CDIIKI S+ R KE F+KRRQRLIGP G +K
Sbjct: 122 LRLLEDGTFCDIIKIRSYTRNKEKFVKRRQRLIGPNGATLK 162
>UniRef50_P25586 Cluster: Ribosomal RNA assembly protein KRR1; n=35;
Eukaryota|Rep: Ribosomal RNA assembly protein KRR1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 316
Score = 120 bits (288), Expect = 7e-26
Identities = 61/105 (58%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Frame = +2
Query: 176 ETNSVDNAWAMKIPKFTPDDNPHG--LLEESKFATLFPKYREQYLKECWPLVQKILSEHH 349
+T+ +D W KI +F +DN G EES F TLFPKYRE YLK W V + L +H+
Sbjct: 12 DTDDIDK-W--KIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRALDKHN 68
Query: 350 IVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQA 484
I LDL+EGS+TVKTTRKT+DP II+KARD +KLL+RSVPF QA
Sbjct: 69 IACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQA 113
Score = 109 bits (262), Expect = 9e-23
Identities = 50/72 (69%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Frame = +1
Query: 601 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKREX*K 780
TLK++ELLT+CY+LVQGNTVSA+GP+KGL +VRR+VED MKNIHP+Y+IK LMIKRE K
Sbjct: 152 TLKALELLTKCYILVQGNTVSAMGPFKGLKEVRRVVEDCMKNIHPIYHIKELMIKRELAK 211
Query: 781 -TQAKNESWDRF 813
+ NE W RF
Sbjct: 212 RPELANEDWSRF 223
Score = 54.8 bits (126), Expect = 3e-06
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CD+IKI +FV KE F+KRRQRL+GP G +K
Sbjct: 116 ILQDDMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLK 154
>UniRef50_Q54UU6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 374
Score = 118 bits (284), Expect = 2e-25
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +2
Query: 248 LLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYII 427
L ++S FATLFPKYRE+YL+E W LV+ +L EH I +LDLIEGS+TV TT+K WDP I
Sbjct: 54 LYDDSSFATLFPKYREKYLQEIWKLVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAI 113
Query: 428 IKARDFMKLLSRSVPFEQASR 490
+KARD +KLLSRSVPFE A +
Sbjct: 114 LKARDLIKLLSRSVPFEHAQK 134
Score = 114 bits (274), Expect = 3e-24
Identities = 52/72 (72%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
Frame = +1
Query: 601 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKREX*K 780
TLK+IELLT+CYVLVQGNTVS++GP+ GLVQVR+IVED +KNIHP+YNIK LMIKRE K
Sbjct: 171 TLKAIELLTKCYVLVQGNTVSSIGPWNGLVQVRKIVEDCLKNIHPIYNIKELMIKRELEK 230
Query: 781 TQA-KNESWDRF 813
+ KNE+W+R+
Sbjct: 231 DETLKNENWERY 242
Score = 58.0 bits (134), Expect = 3e-07
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
VL+D+ CDIIKI FVR KE F+KRRQRL+GP G +K
Sbjct: 135 VLNDDYNCDIIKIGGFVRNKERFVKRRQRLVGPDGSTLK 173
>UniRef50_Q587A1 Cluster: Ribosomal RNA assembly protein, putative;
n=6; Trypanosomatidae|Rep: Ribosomal RNA assembly
protein, putative - Trypanosoma brucei
Length = 325
Score = 116 bits (278), Expect = 1e-24
Identities = 49/95 (51%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Frame = +2
Query: 212 IPKFTPDDNPHGL--LEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSL 385
+P+ T DD P G + E+ FAT FP Y E Y++ WP V+ +L +H + +LDL+EGS+
Sbjct: 49 VPELTQDDVPGGACCVAETTFATQFPSYLESYIRSIWPAVETVLGQHQLTGKLDLMEGSM 108
Query: 386 TVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
TV TTR+TWDPY I+KARDF++LL+R+VP QA +
Sbjct: 109 TVATTRRTWDPYAIVKARDFIRLLARNVPLAQAQK 143
Score = 95.9 bits (228), Expect = 1e-18
Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +1
Query: 601 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKREX*K 780
TLK++E+LT CYVLVQG TV+ +GP KG QVR+IV+D M NIHP+Y +K L+IKRE K
Sbjct: 180 TLKALEILTGCYVLVQGKTVAVMGPVKGCQQVRKIVDDCMNNIHPIYGLKQLLIKRELAK 239
Query: 781 TQ-AKNESWDRFCXHXEQNVPGSTKXK 858
+ K+E W RF ++ + K K
Sbjct: 240 REDLKHEDWSRFIPVYKKTLQNKEKAK 266
Score = 36.3 bits (80), Expect = 1.1
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+ EI CDII I+ + F+KRR RLIGP+ +K
Sbjct: 144 IFQTEITCDIIPISLKGKSTRRFIKRRDRLIGPKAQTLK 182
>UniRef50_Q5KHS1 Cluster: RRNA processing-related protein, putative;
n=1; Filobasidiella neoformans|Rep: RRNA
processing-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 402
Score = 109 bits (263), Expect = 7e-23
Identities = 52/103 (50%), Positives = 67/103 (65%)
Frame = +2
Query: 176 ETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIV 355
+T+ +D+ WAM+ K + LEES FA LFPKYRE YL+ W + L + +
Sbjct: 34 DTDDIDH-WAMEEFKAPNPETHKPFLEESSFALLFPKYREPYLRSVWSSITSALEAYGLA 92
Query: 356 AELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQA 484
ELDL++G +TVKTTRKTWDPYII K RD +KLL+R V QA
Sbjct: 93 CELDLVQGKMTVKTTRKTWDPYIIFKGRDLLKLLARGVNAPQA 135
Score = 104 bits (250), Expect = 3e-21
Identities = 50/72 (69%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Frame = +1
Query: 601 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKREX*K 780
TLK+IELLTECYVLVQGNTVS +G YKGL +VRRI+ D M NIHP+Y IK LMI+RE K
Sbjct: 174 TLKAIELLTECYVLVQGNTVSVMGSYKGLKEVRRIILDCMNNIHPIYRIKELMIRRELAK 233
Query: 781 -TQAKNESWDRF 813
+ NE+WDRF
Sbjct: 234 DPKLANENWDRF 245
Score = 55.6 bits (128), Expect = 2e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +3
Query: 486 LXVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+ +L+D I CDIIKI VR KE F+KRRQR++GP G +K
Sbjct: 136 IKILEDGIACDIIKIGGIVRNKERFVKRRQRIVGPNGSTLK 176
>UniRef50_Q7QYA4 Cluster: GLP_387_52551_53537; n=2; Giardia
intestinalis|Rep: GLP_387_52551_53537 - Giardia lamblia
ATCC 50803
Length = 328
Score = 104 bits (250), Expect = 3e-21
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = +2
Query: 167 EVEETNSVDNAWAMKIPKFTPDDNPHG-LLEESKFATLFPKYREQYLKECWP-LVQKILS 340
E + T D + P+F P+DN G LL+ S F+TLFP YRE Y+ W L + S
Sbjct: 21 ERDMTGRTDVPEGWREPEFRPEDNKSGALLDVSSFSTLFPMYREPYITSIWKDLANMLSS 80
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASRC 493
++ I AELDL +G++TV+TT KTWDP I+ AR+ + +LSRS+ FEQA RC
Sbjct: 81 KYGIAAELDLQKGTITVQTTDKTWDPAAILSARNMIWMLSRSMTFEQAKRC 131
Score = 78.6 bits (185), Expect = 2e-13
Identities = 43/109 (39%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = +1
Query: 493 C*MTKLDATLLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVG 672
C ++D ++++ ++ ++K F TLK+IELLT+ + VQGNTV+ +G
Sbjct: 131 CFENEVDCDIIRIKNMASRKDSFIKRRARFVGPNAQTLKAIELLTDTKIQVQGNTVAVMG 190
Query: 673 PYKGLVQVRRIVEDTM-KNIHPMYNIKSLMIKREX*K-TQAKNESWDRF 813
+G+ VR IV D + +NIHP+ +IK+LMIKRE K + NE W RF
Sbjct: 191 ASRGVGLVRNIVTDCIERNIHPVQHIKTLMIKRELAKIPEMANEDWSRF 239
>UniRef50_Q5N8D1 Cluster: Rev protein (42.9 kD)-like; n=9;
Magnoliophyta|Rep: Rev protein (42.9 kD)-like - Oryza
sativa subsp. japonica (Rice)
Length = 421
Score = 94.7 bits (225), Expect = 3e-18
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Frame = +1
Query: 505 KLDATLLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKG 684
++ ++K+ + K+ F TLK+IE+LT CY+LVQGNT +A+G +KG
Sbjct: 167 EMSCAIIKIGSIIRNKERFVKRRGRLLGPNLSTLKAIEILTGCYILVQGNTAAAMGYWKG 226
Query: 685 LVQVRRIVEDTMKNI-HPMYNIKSLMIKREX*KTQA-KNESWDRF 813
L QV R+VED +KN+ HP+Y+IK L+IKRE K A +ESWD+F
Sbjct: 227 LKQVVRVVEDCIKNVKHPVYHIKELLIKRELVKNPALAHESWDKF 271
Score = 85.4 bits (202), Expect(2) = 6e-20
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +2
Query: 293 EQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVP 472
++YL+E WP+V+ L E + EL+L+EGS+TV TTRKT DPYIIIKA + +KLLSRSVP
Sbjct: 97 KKYLQEAWPIVKGALKEFGVACELNLVEGSMTVSTTRKTKDPYIIIKANELIKLLSRSVP 156
Query: 473 FEQA 484
QA
Sbjct: 157 APQA 160
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +3
Query: 486 LXVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGP 590
+ +L+DE+ C IIKI S +R KE F+KRR RL+GP
Sbjct: 161 IKILNDEMSCAIIKIGSIIRNKERFVKRRGRLLGP 195
Score = 35.5 bits (78), Expect(2) = 6e-20
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 209 KIPKFTPDDNPHGLLEESKFATLFPKYR 292
KI +F P N G+LE + F+TLFP+YR
Sbjct: 41 KIEEFDPSWNEGGMLEVTSFSTLFPQYR 68
>UniRef50_A2EWA3 Cluster: Ribosomal RNA assembly protein mis3,
putative; n=1; Trichomonas vaginalis G3|Rep: Ribosomal
RNA assembly protein mis3, putative - Trichomonas
vaginalis G3
Length = 298
Score = 93.5 bits (222), Expect = 7e-18
Identities = 44/90 (48%), Positives = 59/90 (65%)
Frame = +2
Query: 221 FTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTT 400
F D + LLEES F LFP YRE+YL + W +Q + + I E+D G++++KTT
Sbjct: 11 FQKGDMKYKLLEESSFKVLFPHYREKYLTDNWKKIQDKMDSYGINIEVDYKNGNISLKTT 70
Query: 401 RKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
KTWDP I+ ARD +KL++RSVP EQA R
Sbjct: 71 DKTWDPVAILNARDAIKLVARSVPIEQAFR 100
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/72 (54%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = +1
Query: 601 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKREX*K 780
TLK++ELLT+CY+LVQG+TVS +G +G+ ++V D M NIHP+Y+IK LM+KR+ K
Sbjct: 137 TLKALELLTQCYILVQGHTVSIIGNIRGINDASKVVVDCMNNIHPVYHIKRLMVKRDLMK 196
Query: 781 TQA-KNESWDRF 813
A NE WDR+
Sbjct: 197 NPAMANEDWDRY 208
Score = 36.3 bits (80), Expect = 1.1
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 474 LNKPLXVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+ + V ++ +II I +R +E F KRRQRL+GP G +K
Sbjct: 95 IEQAFRVFEEGTESNIIIIGKHIRNQERFNKRRQRLLGPGGSTLK 139
>UniRef50_Q8SVW2 Cluster: Putative uncharacterized protein
ECU04_0510; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU04_0510 - Encephalitozoon
cuniculi
Length = 283
Score = 87.0 bits (206), Expect = 6e-16
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +1
Query: 598 VTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKREX* 777
+TLK+I++LT CYVLV G TVS +G ++G+ + ++IV D M NIHPMY IK L+ KR+
Sbjct: 132 MTLKAIQILTRCYVLVHGKTVSIIGGFRGVEEAKKIVVDCMNNIHPMYQIKRLVEKRKME 191
Query: 778 KTQAK-NESWDRFCXHXEQNVPGSTKXK 858
+ K NE W RF +++ S K K
Sbjct: 192 SDETKENEDWSRFLPQVKKSSKKSKKKK 219
Score = 70.1 bits (164), Expect = 7e-11
Identities = 35/91 (38%), Positives = 52/91 (57%)
Frame = +2
Query: 218 KFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKT 397
KF+ D H E S A +FPKYRE+Y+++ + + L I +DL + + V T
Sbjct: 6 KFSDGDFKHEFAEMSSEAVMFPKYREKYIEQTQKYIVRALEAKKISCRIDLEKRVIDVMT 65
Query: 398 TRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
R T DP+I IKA +F+KL+ R V E+A +
Sbjct: 66 NRSTRDPFIFIKAVNFVKLVGRGVGIEEAMK 96
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 474 LNKPLXVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIKIH*IINR 629
+ + + VL+DE C++I I V + F KRR RL+GP+ +K I+ R
Sbjct: 91 IEEAMKVLEDEYFCEVIDIKKMVSSDKVFEKRRDRLVGPKEMTLKAIQILTR 142
>UniRef50_Q9AW78 Cluster: Rev interacting protein Rip-1-like
protein; n=1; Guillardia theta|Rep: Rev interacting
protein Rip-1-like protein - Guillardia theta
(Cryptomonas phi)
Length = 262
Score = 73.7 bits (173), Expect = 6e-12
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = +2
Query: 236 NPHGLLEESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWD 415
N L+E S F FPKY+E Y+KE W ++ +I+ IV +++ G + + + K +D
Sbjct: 20 NITNLIEVSCFKIKFPKYQENYIKENWHIINRIMKIRSIVVTINVNLGLVEIMNSLKGFD 79
Query: 416 PYIIIKARDFMKLLSRSVPFEQASR 490
PY IIKA+DF+ L+ R VP QAS+
Sbjct: 80 PYSIIKAKDFITLVCRGVPIFQASK 104
Score = 70.9 bits (166), Expect = 4e-11
Identities = 30/80 (37%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +1
Query: 598 VTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVEDTMKNIHPMYNIKSLMIKREX* 777
VT+K+IELLT+CY+L+QGNTV+ +G ++ L I+ +M N HP++ +K++ IK++
Sbjct: 140 VTVKTIELLTKCYILIQGNTVACMGKFRDLKWCINIITKSMTNNHPIFYLKNIQIKKKLM 199
Query: 778 KTQ-AKNESWDRFCXHXEQN 834
+ K ++WD++ ++N
Sbjct: 200 NDEFFKTKNWDKYLLFEKKN 219
Score = 44.8 bits (101), Expect = 0.003
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+ D+I C+IIKI+ F +++FLK+R+RLIG G +K
Sbjct: 105 IFKDDIFCEIIKISKFTSSRQSFLKKRKRLIGNNGVTVK 143
>UniRef50_Q17XK7 Cluster: Putative lipopolysaccharide biosynthesis
protein; n=3; Helicobacter|Rep: Putative
lipopolysaccharide biosynthesis protein - Helicobacter
acinonychis (strain Sheeba)
Length = 349
Score = 33.5 bits (73), Expect = 7.5
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 456 YREVFRLNKPLXVLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIKIH----*II 623
++E RLN+P+ +L+D++ + ++F++ E LK + GCY H ++
Sbjct: 97 WKECARLNQPVIILEDDVALE----SNFIQALEDCLKSPFDFVRLYGCYWYYHDSNLNVL 152
Query: 624 NRMLCFSPR*YSICSR 671
+ F+P YS+ SR
Sbjct: 153 PKEFVFAPFDYSLKSR 168
>UniRef50_Q0S732 Cluster: Acyl-[acyl-carrier protein] desaturase;
n=12; Actinomycetales|Rep: Acyl-[acyl-carrier protein]
desaturase - Rhodococcus sp. (strain RHA1)
Length = 326
Score = 33.5 bits (73), Expect = 7.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 122 IISLLATLNLIKTNMEVEETNSVDNAWAMKIPKFTPDDNPHGLL 253
I +LL NL + E+ E S D AW + ++T ++N HG++
Sbjct: 78 ITNLLTEDNLPSYHREIAENFSQDGAWGTWVGRWTAEENRHGIV 121
>UniRef50_A2F616 Cluster: Putative uncharacterized protein; n=7;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1486
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 254 EESKFATLFPKYREQYLKECWPLVQKILSEHHIVAELDLIEGSLTVKTTRKTWDPYIIIK 433
EE F +FPK QYL+ C + + +++ L+EG+ T K W Y+ +
Sbjct: 316 EELTFEDVFPKINGQYLRYCMEAFK--MGHPYLLTFKPLVEGAHNENTNSKVWMFYLRVL 373
Query: 434 A 436
A
Sbjct: 374 A 374
>UniRef50_Q6L2G6 Cluster: Putative RNA-binding protein; n=1;
Picrophilus torridus|Rep: Putative RNA-binding protein -
Picrophilus torridus
Length = 186
Score = 33.1 bits (72), Expect = 9.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 601 TLKSIELLTECYVLVQGNTVSAVGPYKGLVQVRRIVE 711
T + IE LT Y+ V GNTVS +G + G+ + VE
Sbjct: 118 TRQIIEELTNTYISVSGNTVSIIGDFIGIGYSKEAVE 154
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,985,280
Number of Sequences: 1657284
Number of extensions: 13001453
Number of successful extensions: 30660
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30645
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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