Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_L09
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55766-1|AAB00557.1| 288|Homo sapiens Rev interacting protein R... 158 3e-38
EF010919-1|ABJ97679.1| 324|Homo sapiens HRB2 variant B protein. 158 3e-38
BC033887-1|AAH33887.1| 381|Homo sapiens KRR1, small subunit (SS... 158 3e-38
BC026107-1|AAH26107.1| 381|Homo sapiens KRR1, small subunit (SS... 158 3e-38
BC005225-1|AAH05225.1| 362|Homo sapiens Unknown (protein for IM... 158 3e-38
BC016778-1|AAH16778.1| 381|Homo sapiens KRR1, small subunit (SS... 155 2e-37
BC008827-1|AAH08827.1| 977|Homo sapiens zinc finger and SCAN do... 32 3.2
AL138837-3|CAI19594.1| 977|Homo sapiens zinc finger and SCAN do... 32 3.2
AL138837-2|CAM12881.1| 1043|Homo sapiens zinc finger and SCAN do... 32 3.2
AK131405-1|BAD18552.1| 1043|Homo sapiens protein ( Homo sapiens ... 32 3.2
>U55766-1|AAB00557.1| 288|Homo sapiens Rev interacting protein
Rip-1 protein.
Length = 288
Score = 158 bits (383), Expect = 3e-38
Identities = 75/110 (68%), Positives = 88/110 (80%)
Frame = +2
Query: 161 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 340
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Score = 110 bits (264), Expect = 8e-24
Identities = 52/99 (52%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 700 RIVEDTMKNIHPMYNIKSLMIKREX*K-TQAKNESWDRF 813
++V DTMKNIHP+YNIKSLMIKRE K ++ +++SW+RF
Sbjct: 204 KVVLDTMKNIHPIYNIKSLMIKRELAKDSELRSQSWERF 242
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CDIIKI S VR KE F+KRRQRLIGP+G +K
Sbjct: 135 ILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLK 173
>EF010919-1|ABJ97679.1| 324|Homo sapiens HRB2 variant B protein.
Length = 324
Score = 158 bits (383), Expect = 3e-38
Identities = 75/110 (68%), Positives = 88/110 (80%)
Frame = +2
Query: 161 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 340
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Score = 87.8 bits (208), Expect = 5e-17
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRGQRLVGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 700 RIVEDTMKNIHPMYNIK 750
++V DTMKNIHP+YNIK
Sbjct: 204 KVVLDTMKNIHPIYNIK 220
Score = 55.6 bits (128), Expect = 2e-07
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CDIIKI S VR KE F+KR QRL+GP+G +K
Sbjct: 135 ILQDDVACDIIKIGSLVRNKERFVKRGQRLVGPKGSTLK 173
>BC033887-1|AAH33887.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 158 bits (383), Expect = 3e-38
Identities = 75/110 (68%), Positives = 88/110 (80%)
Frame = +2
Query: 161 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 340
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Score = 110 bits (264), Expect = 8e-24
Identities = 52/99 (52%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 700 RIVEDTMKNIHPMYNIKSLMIKREX*K-TQAKNESWDRF 813
++V DTMKNIHP+YNIKSLMIKRE K ++ +++SW+RF
Sbjct: 204 KVVLDTMKNIHPIYNIKSLMIKRELAKDSELRSQSWERF 242
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CDIIKI S VR KE F+KRRQRLIGP+G +K
Sbjct: 135 ILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLK 173
>BC026107-1|AAH26107.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 158 bits (383), Expect = 3e-38
Identities = 75/110 (68%), Positives = 88/110 (80%)
Frame = +2
Query: 161 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 340
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Score = 108 bits (260), Expect = 2e-23
Identities = 51/99 (51%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 700 RIVEDTMKNIHPMYNIKSLMIKREX*K-TQAKNESWDRF 813
++ DTMKNIHP+YNIKSLMIKRE K ++ +++SW+RF
Sbjct: 204 KVALDTMKNIHPIYNIKSLMIKRELAKDSELRSQSWERF 242
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CDIIKI S VR KE F+KRRQRLIGP+G +K
Sbjct: 135 ILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLK 173
>BC005225-1|AAH05225.1| 362|Homo sapiens Unknown (protein for
IMAGE:3685682) protein.
Length = 362
Score = 158 bits (383), Expect = 3e-38
Identities = 75/110 (68%), Positives = 88/110 (80%)
Frame = +2
Query: 161 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 340
N + E +V + W K P F+ +DNP GLLEES FATLFPKYRE YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYREAYLKECWPLVQKALN 84
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Score = 110 bits (264), Expect = 8e-24
Identities = 52/99 (52%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 700 RIVEDTMKNIHPMYNIKSLMIKREX*K-TQAKNESWDRF 813
++V DTMKNIHP+YNIKSLMIKRE K ++ +++SW+RF
Sbjct: 204 KVVLDTMKNIHPIYNIKSLMIKRELAKDSELRSQSWERF 242
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CDIIKI S VR KE F+KRRQRLIGP+G +K
Sbjct: 135 ILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLK 173
>BC016778-1|AAH16778.1| 381|Homo sapiens KRR1, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 381
Score = 155 bits (376), Expect = 2e-37
Identities = 74/110 (67%), Positives = 87/110 (79%)
Frame = +2
Query: 161 NMEVEETNSVDNAWAMKIPKFTPDDNPHGLLEESKFATLFPKYREQYLKECWPLVQKILS 340
N + E +V + W K P F+ +DNP GLLEES FATLFPKYR YLKECWPLVQK L+
Sbjct: 27 NQDESELLTVPDGW--KEPAFSKEDNPRGLLEESSFATLFPKYRGAYLKECWPLVQKALN 84
Query: 341 EHHIVAELDLIEGSLTVKTTRKTWDPYIIIKARDFMKLLSRSVPFEQASR 490
EHH+ A LDLIEGS+TV TT+KT+DPYIII+ARD +KLL+RSV FEQA R
Sbjct: 85 EHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVR 134
Score = 110 bits (264), Expect = 8e-24
Identities = 52/99 (52%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Frame = +1
Query: 520 LLKLIHLFAKKKPF*XXXXXXXXXXXVTLKSIELLTECYVLVQGNTVSAVGPYKGLVQVR 699
++K+ L K+ F TLK++ELLT CY++VQGNTVSA+GP+ GL +VR
Sbjct: 144 IIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFSGLKEVR 203
Query: 700 RIVEDTMKNIHPMYNIKSLMIKREX*K-TQAKNESWDRF 813
++V DTMKNIHP+YNIKSLMIKRE K ++ +++SW+RF
Sbjct: 204 KVVLDTMKNIHPIYNIKSLMIKRELAKDSELRSQSWERF 242
Score = 58.8 bits (136), Expect = 2e-08
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 492 VLDDEIGCDIIKINSFVRKKETFLKRRQRLIGPQGCYIK 608
+L D++ CDIIKI S VR KE F+KRRQRLIGP+G +K
Sbjct: 135 ILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLK 173
>BC008827-1|AAH08827.1| 977|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 977
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 202 GYEDTQIYTRR*PAWPFRRK*IR--HIISKVSRAIPERMLALGTENT*RTSHCCRIRF 369
GYE+T+ + PF K +R H S+V RAI ER+ ALG RT CR RF
Sbjct: 421 GYEETKAFLAILSESPFSEK-LRTCHQNSQVYRAIAERLCALGFL---RTLEQCRYRF 474
>AL138837-3|CAI19594.1| 977|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 977
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 202 GYEDTQIYTRR*PAWPFRRK*IR--HIISKVSRAIPERMLALGTENT*RTSHCCRIRF 369
GYE+T+ + PF K +R H S+V RAI ER+ ALG RT CR RF
Sbjct: 421 GYEETKAFLAILSESPFSEK-LRTCHQNSQVYRAIAERLCALGFL---RTLEQCRYRF 474
>AL138837-2|CAM12881.1| 1043|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 1043
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 202 GYEDTQIYTRR*PAWPFRRK*IR--HIISKVSRAIPERMLALGTENT*RTSHCCRIRF 369
GYE+T+ + PF K +R H S+V RAI ER+ ALG RT CR RF
Sbjct: 487 GYEETKAFLAILSESPFSEK-LRTCHQNSQVYRAIAERLCALGFL---RTLEQCRYRF 540
>AK131405-1|BAD18552.1| 1043|Homo sapiens protein ( Homo sapiens
cDNA FLJ16509 fis, clone HCHON2004858, moderately
similar to Zinc finger protein 29. ).
Length = 1043
Score = 31.9 bits (69), Expect = 3.2
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 202 GYEDTQIYTRR*PAWPFRRK*IR--HIISKVSRAIPERMLALGTENT*RTSHCCRIRF 369
GYE+T+ + PF K +R H S+V RAI ER+ ALG RT CR RF
Sbjct: 487 GYEETKAFLAILSESPFSEK-LRTCHQNSQVYRAIAERLCALGFL---RTLEQCRYRF 540
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,484,739
Number of Sequences: 237096
Number of extensions: 1974097
Number of successful extensions: 6828
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6828
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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