Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L08
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0511 + 14907475-14907933,14907948-14908178,14908520-149088...    31   1.7  
06_03_0846 - 25328224-25330613,25330716-25330794                       30   2.9  
05_04_0357 + 20602830-20602848,20604210-20604250,20605770-206065...    29   5.1  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   9.0  

>05_03_0511 +
           14907475-14907933,14907948-14908178,14908520-14908855,
           14909571-14910126,14910217-14910424,14910519-14910885,
           14910988-14911110
          Length = 759

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 215 EELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAXSTESLRSNFLVS 364
           EELR  V       T    FGT++DS+N   + LKP  S+ +    F +S
Sbjct: 633 EELRVLVVKEAVRVTEAITFGTLIDSYNAAPEFLKPLISSGNPAGPFKIS 682


>06_03_0846 - 25328224-25330613,25330716-25330794
          Length = 822

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +2

Query: 149 KRDAPKEDNSLNTLAESAKKTIEELREKVESALAPETVKKNF--GTMVDSFNEFYKNLKP 322
           ++D  K D+   TL +   + I   RE  ES L  + + +      + D+FN F K  K 
Sbjct: 504 RKDCMKTDHWFKTLLKVWMQDINAKREADESILLSKYIAEPSLPQDLKDAFNNFQKQAKD 563

Query: 323 AXSTESLRSNFLVS 364
             S+E+  +  L+S
Sbjct: 564 YISSETAATEALLS 577


>05_04_0357 +
           20602830-20602848,20604210-20604250,20605770-20606519,
           20606603-20606834,20607412-20607491,20607981-20608106
          Length = 415

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 17  PISLLCGIPLRFWIXLNDVLKYP 85
           P++L CGIP  F   LNDVL  P
Sbjct: 279 PLALSCGIPSTFDEKLNDVLSKP 301


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 161 PKEDNSLNTLAESAKKTIEELREKVE 238
           PKE ++  T+A + +KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,742,481
Number of Sequences: 37544
Number of extensions: 287513
Number of successful extensions: 620
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)