Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_L07
(886 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro... 37 0.043
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P... 37 0.043
BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p pro... 32 0.92
AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA ... 32 0.92
BT023493-1|AAY84893.1| 401|Drosophila melanogaster RE20374p pro... 31 1.6
AE014297-3272|AAF56097.1| 401|Drosophila melanogaster CG6733-PA... 31 1.6
AY071290-1|AAL48912.1| 266|Drosophila melanogaster RE31721p pro... 31 2.1
AE014134-2962|AAF53692.2| 417|Drosophila melanogaster CG10338-P... 31 2.1
BT030161-1|ABN49300.1| 326|Drosophila melanogaster IP17722p pro... 30 3.7
AE014296-621|AAF47752.1| 905|Drosophila melanogaster CG12009-PA... 29 6.5
AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p pro... 29 8.5
AY061368-1|AAL28916.2| 172|Drosophila melanogaster LD29166p pro... 29 8.5
AJ010073-1|CAB45234.1| 614|Drosophila melanogaster XRCC1 protei... 29 8.5
AF132142-1|AAD33589.1| 614|Drosophila melanogaster DNA repair p... 29 8.5
AE014298-727|AAF46025.1| 614|Drosophila melanogaster CG4208-PA ... 29 8.5
AE014296-3623|AAF51785.1| 168|Drosophila melanogaster CG7407-PA... 29 8.5
AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-P... 29 8.5
>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p
protein.
Length = 2201
Score = 36.7 bits (81), Expect = 0.043
Identities = 17/61 (27%), Positives = 37/61 (60%)
Frame = +1
Query: 403 ETKPLMHYKKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKENRKKD*PMNHLK 582
+ KPL ++++A K +V + E E P +++ +P +E EVK + ++ ++K+ ++ L
Sbjct: 162 DNKPLKLFERQAEKTKVQ-VQDEEEQPLVKKEEKPPSEKEVKVKSKEKEKEKEKDVDPLS 220
Query: 583 N 585
N
Sbjct: 221 N 221
>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
isoform A protein.
Length = 2529
Score = 36.7 bits (81), Expect = 0.043
Identities = 17/61 (27%), Positives = 37/61 (60%)
Frame = +1
Query: 403 ETKPLMHYKKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKENRKKD*PMNHLK 582
+ KPL ++++A K +V + E E P +++ +P +E EVK + ++ ++K+ ++ L
Sbjct: 490 DNKPLKLFERQAEKTKVQ-VQDEEEQPLVKKEEKPPSEKEVKVKSKEKEKEKEKDVDPLS 548
Query: 583 N 585
N
Sbjct: 549 N 549
>BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p
protein.
Length = 1132
Score = 32.3 bits (70), Expect = 0.92
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 VETKPLMHYKKEASKRRVHDIGTETES-PEIEEYREPNTEAEVKAEVPKEN 549
VE++P + + E + + +E ES PE E + EP T+AEV+A+ E+
Sbjct: 287 VESQPEVESQPEVEAQPEVEPQSEVESQPEAESHSEPETQAEVEAQPEVES 337
>AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA
protein.
Length = 1132
Score = 32.3 bits (70), Expect = 0.92
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 400 VETKPLMHYKKEASKRRVHDIGTETES-PEIEEYREPNTEAEVKAEVPKEN 549
VE++P + + E + + +E ES PE E + EP T+AEV+A+ E+
Sbjct: 287 VESQPEVESQPEVEAQPEVEPQSEVESQPEAESHSEPETQAEVEAQPEVES 337
>BT023493-1|AAY84893.1| 401|Drosophila melanogaster RE20374p
protein.
Length = 401
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 385 VTYGVVETKPLMHYKKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKENR 552
V Y V+TKP++ K E S+ + I + + + +RE T A++ +E R
Sbjct: 50 VVYPAVQTKPVVIIKWEGSQPELSSIVLNSHTDVVPVFREKWTHEPFSADIDEEGR 105
>AE014297-3272|AAF56097.1| 401|Drosophila melanogaster CG6733-PA
protein.
Length = 401
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 385 VTYGVVETKPLMHYKKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKENR 552
V Y V+TKP++ K E S+ + I + + + +RE T A++ +E R
Sbjct: 50 VVYPAVQTKPVVIIKWEGSQPELSSIVLNSHTDVVPVFREKWTHEPFSADIDEEGR 105
>AY071290-1|AAL48912.1| 266|Drosophila melanogaster RE31721p
protein.
Length = 266
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 163 VQREWMRIKTGMMRIGWDLNKHLLMVDEWRI 255
+Q +W + GW ++ HLL+VDE+R+
Sbjct: 232 IQTKWQEFLALAQQEGWLIHHHLLLVDEYRL 262
>AE014134-2962|AAF53692.2| 417|Drosophila melanogaster CG10338-PA
protein.
Length = 417
Score = 31.1 bits (67), Expect = 2.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 163 VQREWMRIKTGMMRIGWDLNKHLLMVDEWRI 255
+Q +W + GW ++ HLL+VDE+R+
Sbjct: 383 IQTKWQEFLALAQQEGWLIHHHLLLVDEYRL 413
>BT030161-1|ABN49300.1| 326|Drosophila melanogaster IP17722p
protein.
Length = 326
Score = 30.3 bits (65), Expect = 3.7
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 295 GRVSTKDYVISEADAKLTKELLMELEHGDGVTYGVVETKPLMHYKKEASKRRV 453
G S KDY + ++ + T++ L L+ G G Y V T PL+ K + + + V
Sbjct: 95 GSTSIKDYQRALSEERATRKSLNRLKSGFGSGYDNVCTSPLLPRKNKPAPKLV 147
>AE014296-621|AAF47752.1| 905|Drosophila melanogaster CG12009-PA
protein.
Length = 905
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 427 KKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKENRKKD*P 567
+KE S+ + +E E P E + VKA+ PK NR+K P
Sbjct: 177 EKEESEPEPEPVESEPEIPAEPEVQTAKPMKPVKAQKPKPNRRKPQP 223
>AY069775-1|AAL39920.1| 2171|Drosophila melanogaster SD01562p protein.
Length = 2171
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 463 GTETESPEIEEYREPNTEAEVKAEVPKEN 549
G+ E PE EE EP TE+ + E + N
Sbjct: 993 GSHVEQPEQEEETEPGTESTINVEDKRRN 1021
>AY061368-1|AAL28916.2| 172|Drosophila melanogaster LD29166p
protein.
Length = 172
Score = 29.1 bits (62), Expect = 8.5
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 475 ESPEIEEYREPNTEAEVKAEVPKENRKKD*PMNHLKNLFKRKHLKHK 615
E+ + E Y E +TE+EV+ E + + NHL K K L+HK
Sbjct: 75 ETDDDEAYEENSTESEVELI---EEQLPEHSYNHLMGQLKAKRLQHK 118
>AJ010073-1|CAB45234.1| 614|Drosophila melanogaster XRCC1 protein
protein.
Length = 614
Score = 29.1 bits (62), Expect = 8.5
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +1
Query: 97 THVFNEFKFEPSYDLMKYVNGIVQREWMRIKTGMMRIGWDLNKHLLMV-DEWRISSVKPL 273
TH+ FK P Y+ +K IV R W+ K ++ ++ L D + S + L
Sbjct: 463 THLICAFKNTPKYNQVKGKGKIVTRSWIE-KCYELKKYLPWRRYALDTNDIGQPESDEEL 521
Query: 274 SQYAPIEGRVSTKDYVISEADAKLTKEL-LMELEHGDGVTYGVVETKPLMHYKKEASKRR 450
A R S+KD V D+KLT ++E G ++T+ + E +K +
Sbjct: 522 CDEATRPRRDSSKDDVAMLEDSKLTALADQNDVEMNPDALSG-IDTEDELQRVAEENKTK 580
Query: 451 VHDIGTETESPEIEEYREPNTEAEVKAEVPKE 546
+ T ++ + Y E +T+ E E+ K+
Sbjct: 581 KAKLRTTVKTKSQDIY-EVSTDEEDYLELKKK 611
>AF132142-1|AAD33589.1| 614|Drosophila melanogaster DNA repair
protein XRCC1 protein.
Length = 614
Score = 29.1 bits (62), Expect = 8.5
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +1
Query: 97 THVFNEFKFEPSYDLMKYVNGIVQREWMRIKTGMMRIGWDLNKHLLMV-DEWRISSVKPL 273
TH+ FK P Y+ +K IV R W+ K ++ ++ L D + S + L
Sbjct: 463 THLICAFKNTPKYNQVKGKGKIVTRSWIE-KCYELKKYLPWRRYALDTNDIGQPESDEEL 521
Query: 274 SQYAPIEGRVSTKDYVISEADAKLTKEL-LMELEHGDGVTYGVVETKPLMHYKKEASKRR 450
A R S+KD V D+KLT ++E G ++T+ + E +K +
Sbjct: 522 CDEATRPRRDSSKDDVAMLEDSKLTALADQNDVEMNPDALSG-IDTEDELQRVAEENKTK 580
Query: 451 VHDIGTETESPEIEEYREPNTEAEVKAEVPKE 546
+ T ++ + Y E +T+ E E+ K+
Sbjct: 581 KAKLRTTVKTKSQDIY-EVSTDEEDYLELKKK 611
>AE014298-727|AAF46025.1| 614|Drosophila melanogaster CG4208-PA
protein.
Length = 614
Score = 29.1 bits (62), Expect = 8.5
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +1
Query: 97 THVFNEFKFEPSYDLMKYVNGIVQREWMRIKTGMMRIGWDLNKHLLMV-DEWRISSVKPL 273
TH+ FK P Y+ +K IV R W+ K ++ ++ L D + S + L
Sbjct: 463 THLICAFKNTPKYNQVKGKGKIVTRSWIE-KCYELKKYLPWRRYALDTNDIGQPESDEEL 521
Query: 274 SQYAPIEGRVSTKDYVISEADAKLTKEL-LMELEHGDGVTYGVVETKPLMHYKKEASKRR 450
A R S+KD V D+KLT ++E G ++T+ + E +K +
Sbjct: 522 CDEATRPRRDSSKDDVAMLEDSKLTALADQNDVEMNPDALSG-IDTEDELQRVAEENKTK 580
Query: 451 VHDIGTETESPEIEEYREPNTEAEVKAEVPKE 546
+ T ++ + Y E +T+ E E+ K+
Sbjct: 581 KAKLRTTVKTKSQDIY-EVSTDEEDYLELKKK 611
>AE014296-3623|AAF51785.1| 168|Drosophila melanogaster CG7407-PA
protein.
Length = 168
Score = 29.1 bits (62), Expect = 8.5
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 475 ESPEIEEYREPNTEAEVKAEVPKENRKKD*PMNHLKNLFKRKHLKHK 615
E+ + E Y E +TE+EV+ E + + NHL K K L+HK
Sbjct: 71 ETDDDEAYEENSTESEVELI---EEQLPEHSYNHLMGQLKAKRLQHK 114
>AE013599-2783|AAF57626.1| 2599|Drosophila melanogaster CG15099-PA
protein.
Length = 2599
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 463 GTETESPEIEEYREPNTEAEVKAEVPKEN 549
G+ E PE EE EP TE+ + E + N
Sbjct: 1421 GSHVEQPEQEEETEPGTESTINVEDKRRN 1449
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,914,882
Number of Sequences: 53049
Number of extensions: 632078
Number of successful extensions: 1815
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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