Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L07
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical ...    34   0.12 
AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical ...    31   1.4  
Z78015-7|CAB01438.1|  381|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z77657-10|CAB01152.1|  381|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z92831-1|CAB07367.1|  332|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF101318-5|AAC69347.1|  574|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC025716-14|AAK39603.1|  227|Caenorhabditis elegans Hypothetical...    28   7.7  

>AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical
           protein ZK616.1 protein.
          Length = 491

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 406 TKPLMHYKKEASKRRVHDIGTETESPEIEEYREPNTEAEVKAEVPKENRKKD 561
           T PL     E        +  E + PE+ +  EP  E  VK E PK   KK+
Sbjct: 375 TPPLKEKTPEPIPEEPKKVEEEVKKPEVPKNEEPKMEEPVKEEAPKVEEKKE 426


>AF047662-5|AAC04440.1|  385|Caenorhabditis elegans Hypothetical
           protein T22B2.3 protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
 Frame = +1

Query: 154 NGIVQREWMRIKTGMMRIGWDLNKHLLMVDEWRISSVKPLSQYAPIEGRVST----KDYV 321
           +GIVQ+ +  +   +M+I  DL K + ++ E  ISS+ P++    I+G ++     ++ V
Sbjct: 109 DGIVQKPYENVHNEVMQIQRDLGKVVKVIREKYISSI-PVNDSRQIDGLLANVAVYRNKV 167

Query: 322 ISEADAKLTKELLMELEH 375
           + + D  + K   ++  H
Sbjct: 168 VQQIDGLMEKPFPLKSVH 185


>Z78015-7|CAB01438.1|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.9 protein.
          Length = 381

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 533 SALTSASVFGSRYSSISGDSVSVPISWTRRLEASF 429
           + LTS  VFGS   ++SGD    P  W    E S+
Sbjct: 4   AVLTSILVFGSSVRNVSGDKSLCPDGWLLSNETSY 38


>Z77657-10|CAB01152.1|  381|Caenorhabditis elegans Hypothetical
           protein F08H9.9 protein.
          Length = 381

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 533 SALTSASVFGSRYSSISGDSVSVPISWTRRLEASF 429
           + LTS  VFGS   ++SGD    P  W    E S+
Sbjct: 4   AVLTSILVFGSSVRNVSGDKSLCPDGWLLSNETSY 38


>Z92831-1|CAB07367.1|  332|Caenorhabditis elegans Hypothetical
           protein F22G12.3 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 238 VDEWRISSVKPLSQYAPIEGRVSTKDYVISEADAKLTKELLMELE 372
           V +W  S  + + + +     VST+D+ I E +   TKE L E+E
Sbjct: 148 VIDWIKSRQRSIEKLSIYGENVSTEDFAIVENNKGFTKEFLFEME 192


>AF101318-5|AAC69347.1|  574|Caenorhabditis elegans Hypothetical
           protein Y73C8C.7 protein.
          Length = 574

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 25/113 (22%), Positives = 44/113 (38%)
 Frame = +1

Query: 274 SQYAPIEGRVSTKDYVISEADAKLTKELLMELEHGDGVTYGVVETKPLMHYKKEASKRRV 453
           S   P+E ++S+KD   +E +  +  +L +E    +  T        L   KK    R+ 
Sbjct: 260 SNAEPVEVKISSKDVSHAELEESMETKLELESRSNEKETQEPFNDPKLSKPKKSKKNRKS 319

Query: 454 HDIGTETESPEIEEYREPNTEAEVKAEVPKENRKKD*PMNHLKNLFKRKHLKH 612
                + E  E     +    +E   ++ ++ R +     HL     RK LKH
Sbjct: 320 EQTTAKPEEKESNACPKCFRASEYNIKLKEDLRLEKIETKHL-----RKSLKH 367


>AC025716-14|AAK39603.1|  227|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.16 protein.
          Length = 227

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 427 KKEASKRRVHDIGTETESPEIEEY-REPNTEAEVKAEVPKENRKKD*P 567
           KKE S+R        +E PE+E+   EP  E E  A+ P E  K + P
Sbjct: 119 KKEGSQRSARSKKASSEKPEVEKKPEEPPVEDE--AKTPPEKPKVEEP 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,492,646
Number of Sequences: 27780
Number of extensions: 346701
Number of successful extensions: 1204
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)