Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L05
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   4.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   7.4  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 785 LPFNCSVRAPPDTFEKQESTDAAR 714
           +P N + R+ PD  EK  ++D A+
Sbjct: 835 VPLNSTPRSTPDKREKSPTSDKAQ 858


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 193 SFDSAGSDDSGTYLEVPRLWS 255
           S++  G  D+GT+  +PRL S
Sbjct: 402 SYNRLGQIDAGTFKGIPRLAS 422


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 518 NCNPLVTSLLYYHKDVDRYL 577
           N N  + ++LYY+  VDR L
Sbjct: 343 NWNKYIPAILYYNYTVDRDL 362


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 518 NCNPLVTSLLYYHKDVDRYL 577
           N N  + ++LYY+  VDR L
Sbjct: 343 NWNKYIPAILYYNYTVDRDL 362


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 518 NCNPLVTSLLYYHKDVDRYL 577
           N N  + ++LYY+  VDR L
Sbjct: 343 NWNKYIPAILYYNYTVDRDL 362


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +2

Query: 44  NVGSMCVRAA*ANTTLASDRHHSMRSSWRQRVALAPAFCLLCR 172
           N     +RAA    TL+S RH     S R    L   F   CR
Sbjct: 271 NTWQNSLRAADIQPTLSSIRHPESNPSERVMRELGRIFRAYCR 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,755
Number of Sequences: 336
Number of extensions: 4047
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)