Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L05
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY393685-1|AAR02558.1|  150|Homo sapiens immunoglobulin heavy ch...    33   1.4  
AL583839-3|CAI12340.1|  226|Homo sapiens family with sequence si...    31   5.6  
AL353629-3|CAI96103.1|  226|Homo sapiens family with sequence si...    31   5.6  

>AY393685-1|AAR02558.1|  150|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 150

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 22/91 (24%), Positives = 42/91 (46%)
 Frame = +1

Query: 592 FVEPTGSSLENVRASEEGVASAARDSLVHDIYLAVPELKRDRAASVDSCFSKVSGGARTE 771
           ++ P     ++ +  + G A+  RD+ V  +Y+ +  L+ D  A V  C  KV G +R  
Sbjct: 46  YINPNNGGTDSAQKFQ-GRATMTRDTSVSSVYMELRRLRSDDMA-VYYCAGKVVGTSRPF 103

Query: 772 QLNGSANSLTVPGTGLRSRSVDXVLPTAEQS 864
              G    +TV     +  SV  + P+++ +
Sbjct: 104 DHWGQGTLVTVSTASTKGPSVFPLAPSSKST 134


>AL583839-3|CAI12340.1|  226|Homo sapiens family with sequence
           similarity 120A opposite strand protein.
          Length = 226

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
 Frame = -1

Query: 287 GGGVPLPDLRRDHNRGTSR*VPESSDPAESKERLRAPGCGTASKTLVPEP------RAAS 126
           GGG   P+L RD  R  S   PE + P   +   R    G  S  L P P       A++
Sbjct: 8   GGGGGGPELGRDGIREASE--PEQAAPGGQRPFARLRPVGRRSPPLRPVPGRAREAAASA 65

Query: 125 NWISSNDADRTRVW 84
            W S     R+R W
Sbjct: 66  RWFSGEGKPRSRSW 79


>AL353629-3|CAI96103.1|  226|Homo sapiens family with sequence
           similarity 120A opposite strand protein.
          Length = 226

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
 Frame = -1

Query: 287 GGGVPLPDLRRDHNRGTSR*VPESSDPAESKERLRAPGCGTASKTLVPEP------RAAS 126
           GGG   P+L RD  R  S   PE + P   +   R    G  S  L P P       A++
Sbjct: 8   GGGGGGPELGRDGIREASE--PEQAAPGGQRPFARLRPVGRRSPPLRPVPGRAREAAASA 65

Query: 125 NWISSNDADRTRVW 84
            W S     R+R W
Sbjct: 66  RWFSGEGKPRSRSW 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,553,485
Number of Sequences: 237096
Number of extensions: 2757153
Number of successful extensions: 8809
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8809
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)