Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L04
         (890 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    27   0.58 
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    27   1.0  
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       26   1.3  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    26   1.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.1  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   7.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   7.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.4  

>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 0.58
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 738 LTL*VSQFGVXRSLQA-GLCARTPRSARPLRXYPGTYRLEF 857
           L L VS   V R L A G CAR PR  R L+ +    R+ F
Sbjct: 85  LGLQVSAKTVSRRLHAAGFCARRPRKVRKLQHHHVEARIRF 125


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 738 LTL*VSQFGVXRSLQA-GLCARTPRSARPLRXYPGTYRLEF 857
           L L VS   V R L A G CAR PR  R L  +    R+ F
Sbjct: 13  LDLQVSAKTVSRRLHAAGFCARRPRKVRKLLPHHVEARIRF 53


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 112 YIDEFGQTTTRMQ*KKCFICEICDAIALFVT 204
           ++D  GQ T R +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 473 SHVLSCVIPLILWITVLPPLSELIPLAA 390
           S +LS V+ L+L   +LPP S ++PL A
Sbjct: 269 SILLSLVVFLLLVSKILPPTSLVLPLIA 296


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 707 GERGDRYPVSGQGRXXXXA*TGARGAPG 624
           G RGD+  +  QGR       G  GAPG
Sbjct: 24  GIRGDKGEMGEQGRTGAQGNAGPPGAPG 51



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 707 GERGDRYPVSGQGRXXXXA*TGARGAPGKR 618
           GE+G+  PV   G        GA G PG +
Sbjct: 63  GEKGNSGPVGPPGAPGRDGMPGAPGLPGSK 92


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 504 YGSWPFAGLLLTCSFLRYPPDSVDN 430
           +GSW + G ++    L+  PDS DN
Sbjct: 166 FGSWTYDGYMVDLRHLQQTPDS-DN 189


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 192 SNSITNFTNKAFFSLHS 142
           SN+I NFT KAF  L S
Sbjct: 520 SNNIENFTRKAFKDLPS 536


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 707 GERGDRYPVSGQGRXXXXA*TGARGAPGKR 618
           GE+GDR      GR       G RG  G+R
Sbjct: 305 GEKGDRGEPGEPGRSGEKGQAGDRGQVGER 334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,121
Number of Sequences: 2352
Number of extensions: 16559
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)