Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L03
         (902 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          29   0.15 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    27   0.59 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.4  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   5.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   7.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   9.6  

>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 29.5 bits (63), Expect = 0.15
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +2

Query: 569 QAPEQ-YERLARRVEMRFDLE-STGAWSSAVELALAATRPEHRARLQTGLAS 718
           QA  Q Y+ L R+ E R   + + G +  A ELA  A +P+H  +LQT LA+
Sbjct: 260 QANRQLYDDLVRQSETRLKEQVANGNFKQAAELA--ARQPQHFRQLQTSLAT 309


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 27.5 bits (58), Expect = 0.59
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 446 EDLRASGFGPRDRLRPVDWEYACAAMEQLA-RLHALGFALQLQAP 577
           E L   GFGP  ++R   WE A   ME+ A +L  +   L L+ P
Sbjct: 348 EQLEPHGFGPAYQIRKQQWEGARVPMERDANKLQFIVNELFLERP 392


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 290  NSVYDTELLVYEELSKLYRALEEERGVAEPER 385
            +SV D+  L+  E + + R LEE    AEP+R
Sbjct: 999  SSVLDSMDLINGERASIARLLEEHEPEAEPQR 1030


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 598 RQPLVLLRCLQLQREAERVQPRQLLHRGARVLPVHGAQAVAGAEPRRAQ 452
           +QP    +  Q Q++ +R Q +Q  H+G R +P    Q     + R+ Q
Sbjct: 258 QQPQQQQQPQQKQQQLQRRQQQQQQHQGQRYVPPQLRQQAHQQQQRQQQ 306


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -3

Query: 120 HHVAEHRAGAVPLLGVRHVGLAVQAAK 40
           HH   H   A  L G  H    +QAAK
Sbjct: 506 HHHHHHHPTAADLAGYHHQHNVIQAAK 532


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 705 VCSRARCSGRVAASASSTALD 643
           V +R +C+G  +   +STALD
Sbjct: 278 VGARCKCNGHASECTTSTALD 298


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,836
Number of Sequences: 2352
Number of extensions: 8764
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)