Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_L03
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81592-3|CAB04729.2| 389|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z70267-7|CAA94215.1| 303|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z68003-7|CAA91980.1| 303|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 29 4.5
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 29 4.5
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 29 6.0
>Z81592-3|CAB04729.2| 389|Caenorhabditis elegans Hypothetical
protein T16G1.3 protein.
Length = 389
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 734 LHHYTALRRSTLVHADYRTCNLMHRRHXXGALXVRXVDYXKVXRGTPXXD 883
L++Y ++++ LVH D + N+M + + + +DY + G P D
Sbjct: 226 LNNYLGIKKNVLVHGDLWSANIMWKENKDEFRVDKIIDYQSIHLGNPAED 275
>Z81592-5|CAB04727.1| 434|Caenorhabditis elegans Hypothetical
protein T16G1.5 protein.
Length = 434
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 734 LHHYTALRRSTLVHADYRTCNLMHRRHXXGALXVRXVDYXKVXRGTPXXDXLYXVF 901
++ Y ++++ LVH D N++ + + + + +DY + G P D L VF
Sbjct: 264 VNKYAGIQKNVLVHGDLWAANILWKENDGNCVASKVIDYQLIHMGNPAED-LVRVF 318
>Z81592-4|CAB04728.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.4 protein.
Length = 436
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 734 LHHYTALRRSTLVHADYRTCNLMHRRHXXGALXVRXVDYXKVXRGTPXXD 883
L+ Y + R LVH D + N++ + L + +DY + G P D
Sbjct: 263 LNSYIGIERDVLVHGDLWSANILWEENEGKFLVSKVIDYQLIHMGNPAED 312
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.65
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 575 PEQYERLARRVEMRFDLESTGAWSSAVELALAATRPEHRARLQTGL 712
P+Q+ R+ RR EMR LE++G A + L +R H + + GL
Sbjct: 309 PKQFNRIMRRREMRQQLEASGRLPLARQKYLHESRHLHALKRKRGL 354
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.65
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 575 PEQYERLARRVEMRFDLESTGAWSSAVELALAATRPEHRARLQTGL 712
P+Q+ R+ RR EMR LE++G A + L +R H + + GL
Sbjct: 309 PKQFNRIMRRREMRQQLEASGRLPLARQKYLHESRHLHALKRKRGL 354
>Z70267-7|CAA94215.1| 303|Caenorhabditis elegans Hypothetical
protein E02H4.6 protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 674 TRPEHRARLQTGLASXAXRFLHHYTALRRSTLVHADYRTCNLMHRRHXXGALXVRXVDY- 850
TR + R + A R ++ A+ + ++H D +T N+M R + + +DY
Sbjct: 105 TRCDDRRISDLNIIKIAVRLVNVLEAIHQKGVIHRDLKTTNVMIRSRGQSEVNLVLIDYG 164
Query: 851 XKVXRGTP 874
GTP
Sbjct: 165 LSTFNGTP 172
>Z68003-7|CAA91980.1| 303|Caenorhabditis elegans Hypothetical
protein E02H4.6 protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 674 TRPEHRARLQTGLASXAXRFLHHYTALRRSTLVHADYRTCNLMHRRHXXGALXVRXVDY- 850
TR + R + A R ++ A+ + ++H D +T N+M R + + +DY
Sbjct: 105 TRCDDRRISDLNIIKIAVRLVNVLEAIHQKGVIHRDLKTTNVMIRSRGQSEVNLVLIDYG 164
Query: 851 XKVXRGTP 874
GTP
Sbjct: 165 LSTFNGTP 172
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical
protein C38D4.3 protein.
Length = 1784
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 22 YREFLRFCRLDSEPDMTDTEERDRASSVLRDVM 120
Y + FC+L S PD++DT +R+ A L + +
Sbjct: 565 YGKIEEFCQLASRPDISDTLKRELAEWALHEAV 597
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 610 LHAPRQPLVLLR-CLQLQREAERVQPRQLLHRGARVL 503
LH P + LLR CLQ + R+ + +LHRG+ L
Sbjct: 792 LHCPNGTVALLRHCLQQNTDEARMNLQFVLHRGSTFL 828
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 28.7 bits (61), Expect = 6.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -2
Query: 457 AQVLQHQCFLEPPRPRAVQRGEH 389
+Q+L+H+C + PRP ++ +H
Sbjct: 220 SQILEHRCLVSSPRPTDIEEWKH 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,241,011
Number of Sequences: 27780
Number of extensions: 188390
Number of successful extensions: 609
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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