Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_L02
(976 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120; Fung... 183 5e-45
UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24; Vir... 136 8e-31
UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=... 131 2e-29
UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2; Eukaryota|... 129 1e-28
UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6; Dikarya... 118 2e-25
UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2; Crypto... 108 2e-22
UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5; Olig... 102 1e-20
UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia A... 99 1e-19
UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;... 91 4e-17
UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;... 87 5e-16
UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n... 87 6e-16
UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1; Guilla... 87 8e-16
UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1; O... 77 7e-13
UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1; ... 77 7e-13
UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1; Encephalit... 69 1e-10
UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5; ... 62 3e-08
UniRef50_UPI0000D9EE80 Cluster: PREDICTED: similar to ribosomal ... 57 8e-07
UniRef50_Q17L60 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
>UniRef50_Q02543 Cluster: 60S ribosomal protein L18a; n=120;
Fungi/Metazoa group|Rep: 60S ribosomal protein L18a -
Homo sapiens (Human)
Length = 176
Score = 183 bits (446), Expect = 5e-45
Identities = 84/133 (63%), Positives = 97/133 (72%)
Frame = +1
Query: 181 P*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYE 360
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 361 SRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQF 540
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQ + VE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 541 HNSTIXIPIXQTV 579
H+S I P+ V
Sbjct: 146 HDSKIKFPLPHRV 158
>UniRef50_P51418 Cluster: 60S ribosomal protein L18a-2; n=24;
Viridiplantae|Rep: 60S ribosomal protein L18a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 178
Score = 136 bits (329), Expect = 8e-31
Identities = 60/127 (47%), Positives = 80/127 (62%)
Frame = +1
Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESR 366
Y+M++++ + + AKS+FWYFLR+LKK KK+ G NFGIWLRY+SR
Sbjct: 27 YRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIYEKNPTTIKNFGIWLRYQSR 86
Query: 367 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFHN 546
+G HNMY+EYRD ++ GAV Q Y +M +RHR R IQ I + A C+R KQFHN
Sbjct: 87 TGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHN 146
Query: 547 STIXIPI 567
S I P+
Sbjct: 147 SKIKFPL 153
>UniRef50_Q4N436 Cluster: 60S ribosomal protein L18, putative; n=9;
Aconoidasida|Rep: 60S ribosomal protein L18, putative -
Theileria parva
Length = 191
Score = 131 bits (317), Expect = 2e-29
Identities = 62/139 (44%), Positives = 87/139 (62%)
Frame = +1
Query: 151 APDRRTSPNLP*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXX 330
AP ++ +PN Y+M +F+ + ++AKSRFWYF+++L K K++ G
Sbjct: 30 APTKK-NPNPNTYRMSVFAKNSVLAKSRFWYFMKRLNKAKRSGGEILACNRLNEPKKGQV 88
Query: 331 NNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAA 510
NFG+ LRY+SR+G HNMY+EYRDL+ GAV+Q Y DM RHRARA IQ I V I +
Sbjct: 89 KNFGVLLRYKSRTGTHNMYKEYRDLTRTGAVSQMYGDMAGRHRARASCIQIIRVAEISDS 148
Query: 511 ACRRPQVKQFHNSTIXIPI 567
C++P+V Q H + PI
Sbjct: 149 DCKKPKVTQMHGKKLKFPI 167
>UniRef50_Q54MK8 Cluster: Ribosomal protein L18a; n=2;
Eukaryota|Rep: Ribosomal protein L18a - Dictyostelium
discoideum AX4
Length = 191
Score = 129 bits (311), Expect = 1e-28
Identities = 62/141 (43%), Positives = 86/141 (60%)
Frame = +1
Query: 157 DRRTSPNLP*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNN 336
+R +P + Y+MR+F+ I AKSRFWYFL ++ K KK+TG N
Sbjct: 36 ERDANPKI--YRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTEIFEDKPQKVKN 93
Query: 337 FGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAAC 516
FG+++RY SRSG HN+Y+EYRDL+ GAV+Q Y +M +RH AR SI I ++ I A+
Sbjct: 94 FGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHIIDIKEIAASLT 153
Query: 517 RRPQVKQFHNSTIXIPIXQTV 579
RR KQFH+S I P+ +
Sbjct: 154 RRANTKQFHDSKIKFPLTHRI 174
>UniRef50_P05732 Cluster: 60S ribosomal protein L20; n=6;
Dikarya|Rep: 60S ribosomal protein L20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 176
Score = 118 bits (285), Expect = 2e-25
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Frame = +1
Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESR 366
++MR+F+P+ VAKSR+WYFL+ + K KK TG FGIW+RY+SR
Sbjct: 24 FRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSR 83
Query: 367 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXI-XVEVIXAAACRRPQVKQFH 543
SG HNMY+E+RD + GAV Y DM ARHRAR SI+ + VEV RR VKQ
Sbjct: 84 SGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLL 143
Query: 544 NSTIXIPI 567
N + P+
Sbjct: 144 NPHLKFPL 151
>UniRef50_Q5CNE7 Cluster: 60S ribosomal protein L18a; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L18a -
Cryptosporidium hominis
Length = 185
Score = 108 bits (259), Expect = 2e-22
Identities = 54/132 (40%), Positives = 76/132 (57%)
Frame = +1
Query: 169 SPNLP*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIW 348
+P+ +++ IF+P+ +VAKSRF+YF+ +L K KK G NF I
Sbjct: 28 NPHPKVFRVCIFAPNEVVAKSRFFYFMSRLNKVKKANGEILSVTRIFEKRPTYVKNFAIL 87
Query: 349 LRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQ 528
L+Y SR+ V MY+EYRD+S GAV+Q Y ++ HRA+ SIQ I V I A +RP+
Sbjct: 88 LQYRSRTNVVYMYKEYRDISKTGAVSQMYEELAGSHRAQRSSIQIIRVSQIDAKLAKRPK 147
Query: 529 VKQFHNSTIXIP 564
QF NS + P
Sbjct: 148 TTQFFNSKLKFP 159
>UniRef50_Q6BGJ5 Cluster: 60S ribosomal L18A, putative; n=5;
Oligohymenophorea|Rep: 60S ribosomal L18A, putative -
Paramecium tetraurelia
Length = 192
Score = 102 bits (245), Expect = 1e-20
Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Frame = +1
Query: 163 RTSPNLP*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFG 342
+ PN MRIF+ + + AKSRFW+ LR+L K + + G +G
Sbjct: 31 KEDPNPKVISMRIFARNTVAAKSRFWWNLRRLNKLRPSHGQILAVQELFERRDTNVKTYG 90
Query: 343 IWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAA-CR 519
I L+Y+SR+ +HNMY+E+RD ++ GAV+Q Y++M HRA+ +I + V+ +A +
Sbjct: 91 IVLKYQSRTTIHNMYKEFRDTTLNGAVSQLYQEMAGNHRAQPQTIHILRTSVLTKSADIK 150
Query: 520 RPQVKQFHNSTIXIPIXQTV 579
R + Q+ +I PI +TV
Sbjct: 151 RGKTNQYRGDSIRFPIVKTV 170
>UniRef50_Q7QNQ0 Cluster: GLP_7_3170_2649; n=1; Giardia lamblia ATCC
50803|Rep: GLP_7_3170_2649 - Giardia lamblia ATCC 50803
Length = 173
Score = 99.1 bits (236), Expect = 1e-19
Identities = 51/126 (40%), Positives = 69/126 (54%)
Frame = +1
Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESR 366
++M I++P+ IVAKSRFWY L+ LKK K+T G NFG+ LRY SR
Sbjct: 23 FRMTIYAPNEIVAKSRFWYHLKSLKKIKRTHGEILDCQHIEENGDFV-KNFGVLLRYRSR 81
Query: 367 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFHN 546
G HNMYRE R+ + A+ + Y +M + RAR H IQ I V+ + RR +V F
Sbjct: 82 VGQHNMYREVRETTSARAMDKVYSEMAGQCRARYHDIQIINVKEVADEDVRREKVAMFTQ 141
Query: 547 STIXIP 564
+ P
Sbjct: 142 KGVRFP 147
>UniRef50_UPI00004983AA Cluster: 60S ribosomal protein L18a; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18a - Entamoeba histolytica HM-1:IMSS
Length = 173
Score = 91.1 bits (216), Expect = 4e-17
Identities = 44/137 (32%), Positives = 73/137 (53%)
Frame = +1
Query: 157 DRRTSPNLP*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNN 336
D+ +PN ++ R+F+P+ +VAKS+FW L++ K KK N
Sbjct: 12 DKAHNPN-EIFRSRVFAPNYVVAKSKFWMMLKKQHKVKKINAELLQCQPIFEKNPTVVKN 70
Query: 337 FGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAAC 516
+ I+LRY S G+HN+ ++YRD++ GAV Q Y D+ +++R R IQ I + + A
Sbjct: 71 YQIFLRYVSAGGIHNITKQYRDVTRVGAVRQMYNDLASQYRTRQDKIQLISITTVGDKAV 130
Query: 517 RRPQVKQFHNSTIXIPI 567
+ P + QF + P+
Sbjct: 131 KNPVLHQFVGHHVKFPM 147
>UniRef50_A2E7V4 Cluster: Ribosomal protein L18ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L18ae,
putative - Trichomonas vaginalis G3
Length = 213
Score = 87.4 bits (207), Expect = 5e-16
Identities = 41/131 (31%), Positives = 64/131 (48%)
Frame = +1
Query: 175 NLP*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLR 354
N P ++++F+PD ++AKS+FW +++ + KK G N+GIWL
Sbjct: 20 NPPAVRVQVFAPDEVIAKSKFWTVAQRIARLKKAHGEVLAVKHVIEPEPTRVKNYGIWLS 79
Query: 355 YESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVK 534
Y S HN+Y+EYRD + GAVT+ ++ H A +I I V + +
Sbjct: 80 YRSTRNHHNVYKEYRDTTTEGAVTKMLAELAGTHDTTADNISIIKVAEVADKDLVHKNIS 139
Query: 535 QFHNSTIXIPI 567
QF + I PI
Sbjct: 140 QFTHENIKFPI 150
>UniRef50_Q4Q5J4 Cluster: 60S ribosomal protein L18a, putative; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18a,
putative - Leishmania major
Length = 179
Score = 87.0 bits (206), Expect = 6e-16
Identities = 44/129 (34%), Positives = 64/129 (49%)
Frame = +1
Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESR 366
YK +F+P+ +VAKSRFW +R K K T G N Y R
Sbjct: 27 YKFEVFAPNFVVAKSRFWRMMRVKNKVKATHGDVLSCKVVKDAKLVARNYLVDIAYYSQR 86
Query: 367 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFHN 546
G M +E+RD+S GAV+Q Y D+ +RHRAR H+I+ + V+ I + + Q+H
Sbjct: 87 CGYTRMVKEFRDVSKTGAVSQAYHDLASRHRARYHNIEVLNVKSIPDHEVKHLSIAQYHA 146
Query: 547 STIXIPIXQ 573
+ P+ Q
Sbjct: 147 PNLSFPLLQ 155
>UniRef50_Q98S89 Cluster: 60S ribosomal protein L18A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L18A -
Guillardia theta (Cryptomonas phi)
Length = 159
Score = 86.6 bits (205), Expect = 8e-16
Identities = 43/129 (33%), Positives = 65/129 (50%)
Frame = +1
Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESR 366
Y M+ FSP+ I AKS+FW L++ +K KK G +GIW + + +
Sbjct: 22 YFMKNFSPNKITAKSKFWSVLKKTQKLKKKNGSIIIAQKIYEKKNNFVKTYGIWSKVKIK 81
Query: 367 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFHN 546
+G N+++EYRD + GAV Q Y ++G R + + + + VE I + VKQF
Sbjct: 82 NGYVNLFKEYRDFMMTGAVEQFYIELGGRFKIKPKDVTILRVERIKEIESSKSNVKQFLG 141
Query: 547 STIXIPIXQ 573
I PI Q
Sbjct: 142 KKINYPITQ 150
>UniRef50_Q015Y8 Cluster: Putative ribosomal protein L18a; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein L18a
- Ostreococcus tauri
Length = 254
Score = 77.0 bits (181), Expect = 7e-13
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +1
Query: 334 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAA 513
NFGIW+RY+SR+G HN Y+EYR+ ++ AV Y +M +RHR R+ +Q I + +
Sbjct: 151 NFGIWIRYQSRTGFHNSYKEYRETTMNKAVDALYEEMASRHRVRSSQLQIIKIAEVSDEN 210
Query: 514 CRRPQVKQFHNSTIXIPIXQTV 579
RR +QF + P+ V
Sbjct: 211 VRRENTRQFLAEDLSFPVVNKV 232
>UniRef50_Q4PBN4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 532
Score = 77.0 bits (181), Expect = 7e-13
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 334 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXV-EVIXAA 510
NF +WLRY SRSG HNMY+E+R LS A Y+DM ARHRAR SI + + E+ +
Sbjct: 434 NFAVWLRYNSRSGTHNMYKEFRALSRAEAAESLYQDMAARHRARFASIHILKIAEIEKSE 493
Query: 511 ACRRPQVKQFHNSTIXIPI 567
+RP +KQ + P+
Sbjct: 494 DVKRPYIKQLMAPGLKFPL 512
Score = 53.2 bits (122), Expect = 1e-05
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +1
Query: 157 DRRTSPNLP*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTG 282
++ SP L Y+MRIF+ + VA+SRFWYF+RQL+K KK TG
Sbjct: 325 EKEPSPKL--YRMRIFAVNKSVAESRFWYFVRQLRKMKKATG 364
>UniRef50_Q8SRD7 Cluster: RIBOSOMAL PROTEIN L18A; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN L18A -
Encephalitozoon cuniculi
Length = 173
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/123 (28%), Positives = 60/123 (48%)
Frame = +1
Query: 199 IFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESRSGVH 378
IF+ + + AK++F+ L + K K T G N+GI Y SRSGVH
Sbjct: 31 IFTKNHVFAKAKFFKILEKKYKIKATKGLIIDCKEIPEPSFKEVQNYGIRFVYRSRSGVH 90
Query: 379 NMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFHNSTIX 558
N Y+E R +S A+ R++ R + + ++ I V+V+ + +R + +F + +
Sbjct: 91 NAYKECRAISKCWAIDHVLRELAGRQKLKRSAVDIISVDVVPVESLKRAKTIEFADENVE 150
Query: 559 IPI 567
PI
Sbjct: 151 FPI 153
>UniRef50_Q0IFJ6 Cluster: Putative uncharacterized protein; n=5;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 153
Score = 61.7 bits (143), Expect = 3e-08
Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Frame = +1
Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFG-IWLRYES 363
+K++ F+P IVAK RF + KFK+TT + G + LRY+S
Sbjct: 23 FKIKTFAPAQIVAKFRF------VSKFKQTTSEIVSVKRILEKTPLRLMSLGMVRLRYDS 76
Query: 364 RSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFH 543
SG H + + CY +RHRARAHSI+ I VE + + RR +KQF+
Sbjct: 77 CSGTHKV------------LLFCYSGTPSRHRARAHSIKIIKVESVKTSKTRRVHIKQFY 124
Query: 544 NSTIXIPIXQ 573
+S I + Q
Sbjct: 125 DSKIRFLLVQ 134
>UniRef50_UPI0000D9EE80 Cluster: PREDICTED: similar to ribosomal
protein L18a, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L18a, partial -
Macaca mulatta
Length = 124
Score = 56.8 bits (131), Expect = 8e-07
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 181 P*YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTG 282
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 84 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSG 117
>UniRef50_Q17L60 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 175
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/76 (36%), Positives = 36/76 (47%)
Frame = +1
Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESR 366
+K++IF+P IV K FW F+RQL +FKKTT N G LR R
Sbjct: 20 FKIKIFAPAQIVPKCHFWCFMRQLCQFKKTTSEIVLVKRILEKTPLRLMNLGRRLR---R 76
Query: 367 SGVHNMYREYRDLSVG 414
G + R +R L G
Sbjct: 77 RGFTTITRRWRALCCG 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,253,334
Number of Sequences: 1657284
Number of extensions: 10047792
Number of successful extensions: 20724
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20709
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 91040045921
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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