Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L02
         (976 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    25   0.89 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.89 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.89 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   8.3  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 335 LLILMGLFXXISLIETISPVVFLNFLSCLR 246
           +LIL  L   + ++ET++P+ F++F   LR
Sbjct: 39  VLILKVLVDQVMILETMTPLDFMDFRCYLR 68


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 335 LLILMGLFXXISLIETISPVVFLNFLSCLR 246
           +LIL  L   + ++ET++P+ F++F   LR
Sbjct: 99  VLILKVLVDQVMILETMTPLDFMDFRCYLR 128


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 335 LLILMGLFXXISLIETISPVVFLNFLSCLR 246
           +LIL  L   + ++ET++P+ F++F   LR
Sbjct: 99  VLILKVLVDQVMILETMTPLDFMDFRCYLR 128


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 400 HGIHGTCCVHLNETHSVARYQNY 332
           HG+H   C      +S+  +QN+
Sbjct: 215 HGVHNELCNLCQVANSIYGFQNF 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,402
Number of Sequences: 336
Number of extensions: 2508
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27616611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)