Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_L02
         (976 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0131 + 27898028-27898042,27898159-27898274,27898361-278984...   133   2e-31
01_06_0730 - 31552747-31553088,31553583-31553646,31553743-315538...   130   2e-30
01_06_0180 - 27260099-27260440,27261236-27261350,27261403-272615...   111   8e-25
11_06_0007 - 19171122-19172036                                         28   9.8  
11_01_0129 - 1073002-1073073,1073463-1073585,1073667-1073732,107...    28   9.8  

>05_07_0131 +
           27898028-27898042,27898159-27898274,27898361-27898424,
           27899450-27899791
          Length = 178

 Score =  133 bits (321), Expect = 2e-31
 Identities = 58/127 (45%), Positives = 79/127 (62%)
 Frame = +1

Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESR 366
           Y+M++++ + + AKS+FWYFLR+LKK KK+ G                 N+GIWLRY+SR
Sbjct: 27  YRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFERNPTTIKNYGIWLRYQSR 86

Query: 367 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFHN 546
           +G HNMY+EYRD ++ GAV Q Y +M +RHR R   IQ I    +    C+R   KQFHN
Sbjct: 87  TGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHN 146

Query: 547 STIXIPI 567
           S I  P+
Sbjct: 147 SNIKFPL 153


>01_06_0730 -
           31552747-31553088,31553583-31553646,31553743-31553858,
           31553964-31553978
          Length = 178

 Score =  130 bits (314), Expect = 2e-30
 Identities = 57/127 (44%), Positives = 78/127 (61%)
 Frame = +1

Query: 187 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESR 366
           Y+M++++ + + AKS+FWYFLR+LKK KK+ G                 N+GIWLRY+SR
Sbjct: 27  YRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTTIKNYGIWLRYQSR 86

Query: 367 SGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFHN 546
           +G HNMY+EYRD ++ GAV Q Y +M +RHR R   IQ I    +    C+R   KQFH 
Sbjct: 87  TGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHK 146

Query: 547 STIXIPI 567
           S I  P+
Sbjct: 147 SDIKFPL 153


>01_06_0180 -
           27260099-27260440,27261236-27261350,27261403-27261518,
           27261594-27261608
          Length = 195

 Score =  111 bits (267), Expect = 8e-25
 Identities = 50/109 (45%), Positives = 64/109 (58%)
 Frame = +1

Query: 241 YFLRQLKKFKKTTGXXXXXXXXXXXXXXXXNNFGIWLRYESRSGVHNMYREYRDLSVGGA 420
           YFLR+LKK KK+ G                 N+GIWLRY+SR+G HNMY+EYRD ++ GA
Sbjct: 62  YFLRKLKKVKKSNGQMLAINEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGA 121

Query: 421 VTQCYRDMGARHRARAHSIQXIXVEVIXAAACRRPQVKQFHNSTIXIPI 567
           V Q Y +M +RHR R   IQ I    +    C+R   KQFHN +I  P+
Sbjct: 122 VEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHNGSIKFPL 170


>11_06_0007 - 19171122-19172036
          Length = 304

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 542 WNCLTCGRRHAAALITSTXXICI 474
           W C  CG R AA L+     +C+
Sbjct: 252 WGCKACGEREAAVLLLPCRHLCL 274


>11_01_0129 -
           1073002-1073073,1073463-1073585,1073667-1073732,
           1074227-1074347,1074536-1074603,1074792-1074863,
           1076045-1076222,1077554-1077888
          Length = 344

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = -2

Query: 348 PDTKIINLDGAFLXNFLNRDNFTSGLLELLKLSQEI 241
           PD++I+ +DGAF       D F +G +E+L+L++E+
Sbjct: 175 PDSRIVYIDGAF-------DLFHAGHVEILRLAREL 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,721,148
Number of Sequences: 37544
Number of extensions: 294457
Number of successful extensions: 694
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)