Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K22
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0520 - 25871932-25872074,25872234-25872294,25873267-258733...    63   2e-10
02_05_0012 - 24959542-24959684,24960132-24960192,24960995-249611...    63   2e-10
06_01_0096 - 794148-794246,795682-796975,798960-799417                 29   6.3  

>04_04_0520 -
           25871932-25872074,25872234-25872294,25873267-25873389,
           25873465-25873531,25873710-25873780,25873853-25874004,
           25874082-25874158,25874323-25874435,25874503-25874598,
           25874703-25874734,25874838-25874884,25875015-25875068,
           25875212-25875289,25875607-25875698
          Length = 401

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/48 (52%), Positives = 36/48 (75%)
 Frame = +1

Query: 394 RYNAEYIAGGSVQNSLRVAQWILKKPNICTYFGCVGNDEYAKLLKERA 537
           + N EYIAGGS QNS+RVAQW+L+ P   +Y GC+G D++ + +K+ A
Sbjct: 82  KVNVEYIAGGSTQNSIRVAQWMLQIPGATSYMGCIGKDKFGEEMKKDA 129



 Score = 37.9 bits (84), Expect = 0.010
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 87  EGLLVGIGNPLLDISASVDEDLL 155
           EG+L+G+GNPLLDISA VDE  L
Sbjct: 7   EGVLLGMGNPLLDISAVVDEAFL 29



 Score = 35.1 bits (77), Expect = 0.073
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +1

Query: 175 PXDAIMAEEKHMPLYSELVDK 237
           P +AI+AEEKH+P+Y+EL  K
Sbjct: 62  PGNAILAEEKHLPMYNELASK 82


>02_05_0012 -
           24959542-24959684,24960132-24960192,24960995-24961117,
           24961196-24961262,24961510-24961580,24961650-24961747,
           24962279-24962355,24963568-24963635,24963754-24963855,
           24963945-24963976,24964066-24964112,24964263-24964316,
           24964952-24965034
          Length = 341

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 24/46 (52%), Positives = 35/46 (76%)
 Frame = +1

Query: 400 NAEYIAGGSVQNSLRVAQWILKKPNICTYFGCVGNDEYAKLLKERA 537
           N EYIAGG+ QNS+RVAQW+L+ P   +Y GC+G D++ + +K+ A
Sbjct: 55  NVEYIAGGATQNSIRVAQWMLQTPGATSYMGCIGKDKFGEEMKKNA 100



 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +3

Query: 87  EGLLVGIGNPLLDISASVDEDLLKKYDL 170
           EG+L+G+GNPLLDISA VD+  L KYD+
Sbjct: 4   EGVLLGMGNPLLDISAVVDDAFLTKYDV 31



 Score = 32.3 bits (70), Expect = 0.51
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 181 DAIMAEEKHMPLYSELVDK 237
           +AI+AEEKH+P+Y EL  K
Sbjct: 35  NAILAEEKHLPMYDELASK 53


>06_01_0096 - 794148-794246,795682-796975,798960-799417
          Length = 616

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 554 CYSHIVVHIIFILYYLLDLVLTRCLSRVFWLSTRDAIIFSANYFILCTY 700
           C   ++V +++ILY+L  L+    L  +  +   DA+      FI+C +
Sbjct: 394 CIKPVLVLVLWILYFLFPLISLPLLHPIQIIIRADAVRMQLLGFIICLF 442


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,325,673
Number of Sequences: 37544
Number of extensions: 358908
Number of successful extensions: 654
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)