Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K22
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81107-6|CAB03230.1|  342|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z67737-1|CAA91536.2|  399|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U40415-1|AAK39255.4|  445|Caenorhabditis elegans Hypothetical pr...    29   5.6  
U23529-1|AAK39160.1|  269|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>Z81107-6|CAB03230.1|  342|Caenorhabditis elegans Hypothetical
           protein R07H5.8 protein.
          Length = 342

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +1

Query: 397 YNAEYIAGGSVQNSLRVAQWILKKPNICTYFGCVGNDEYAKLLKERA 537
           +  EYI GG+ QNSLRVAQWIL  PN   +FG VG D+Y  LL  +A
Sbjct: 56  FKVEYIPGGAAQNSLRVAQWILNAPNRTVFFGAVGKDQYGDLLASKA 102



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 87  EGLLVGIGNPLLDISASVDEDLLKKYDL 170
           E  L+G+ NPLLDI  +V++  L K+ L
Sbjct: 6   ENTLIGMCNPLLDIQTTVEKAFLDKWGL 33


>Z67737-1|CAA91536.2|  399|Caenorhabditis elegans Hypothetical
           protein T01H10.1 protein.
          Length = 399

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 577 YYFYIILFIRFSINTLPVQSILVK 648
           YYFY+I+F  F IN++ +  + +K
Sbjct: 260 YYFYMIVFPSFVINSVSIVGVFIK 283


>U40415-1|AAK39255.4|  445|Caenorhabditis elegans Hypothetical
           protein K02G10.3 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 324 YIP*LLRIFINGDLDFITFAFYI*V*CRVYCWWKRSEFIKSSTMD 458
           Y+P +L    +  L  +  AFY  V   +YC WK  E +    +D
Sbjct: 310 YVPPVLNNVFSAGLASVAMAFYPTVSIAMYCLWKAIETVYFDLVD 354


>U23529-1|AAK39160.1|  269|Caenorhabditis elegans Hypothetical
           protein C15B12.2 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 565 YCGAYYFYIILFIRFSINTLPVQ-SILVKYP*RHNFF 672
           +CG  ++YI+ FI + + TL +    L  Y  RHN F
Sbjct: 57  FCGHMFWYILTFITYLVWTLLLWIPCLYHYTCRHNSF 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,636,292
Number of Sequences: 27780
Number of extensions: 351756
Number of successful extensions: 721
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)