Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_K21
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0089 - 6668179-6668316,6668386-6668565,6668648-6668729,666... 210 1e-54
05_07_0334 - 29358823-29360247 87 2e-17
01_05_0347 + 21226612-21226857,21227623-21227787,21228183-212283... 84 1e-16
06_01_0035 + 358669-359007,359458-359617,359723-360582 83 2e-16
02_05_0109 - 25909126-25909308,25909454-25909660,25910130-259103... 80 2e-15
04_04_0638 - 26877640-26877825,26877954-26878160,26878866-268789... 77 1e-14
01_05_0012 + 17147764-17148141,17148316-17148465,17149360-171497... 30 2.2
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868... 30 2.9
10_08_0748 - 20277623-20277736,20277956-20279425 28 8.7
08_02_1110 + 24371934-24374763,24375034-24375518 28 8.7
>02_02_0089 -
6668179-6668316,6668386-6668565,6668648-6668729,
6669317-6669405,6669503-6669580,6670502-6670559,
6670727-6670956,6671174-6671318,6671417-6671458,
6671681-6671853
Length = 404
Score = 210 bits (512), Expect = 1e-54
Identities = 95/152 (62%), Positives = 121/152 (79%)
Frame = +3
Query: 219 LMLVFIFNLLYLSLSSGIEIPEEFQKSNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVK 398
L+L+ L+ L+ S+ + H NNWAVLV TSRFWFNYRH+AN LS+YR+VK
Sbjct: 16 LVLLLPALLMLLAFSTSSSAAASSPGAMHNNNWAVLVCTSRFWFNYRHMANTLSLYRTVK 75
Query: 399 RLGIPDSQIILMISDDMACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIR 578
RLGIPD +IILM++DDMACNPRN PA +FN+ + Q+N+YGD+VEVDYRGYEV+VENF+R
Sbjct: 76 RLGIPDERIILMLADDMACNPRNNYPAQVFNNENHQLNLYGDNVEVDYRGYEVTVENFLR 135
Query: 579 LLTGRVPPDTPRSKQLLTDEGSNILIYLTGHG 674
+LTGR PRSK+LL+DEGS+IL+Y+TGHG
Sbjct: 136 VLTGRHESAVPRSKRLLSDEGSHILLYMTGHG 167
Score = 48.4 bits (110), Expect = 8e-06
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +2
Query: 755 QKKRYNEIFFIIDTCQASSMYEKFYSPXXLXTASSLVGEKSLXHHV 892
+K R+ E+ ++DTCQA++++ + SP L SS+ GE S HH+
Sbjct: 194 EKHRFKELLIMVDTCQAATLFSQLQSPGVLTIGSSMKGENSYSHHL 239
Score = 36.7 bits (81), Expect = 0.025
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 676 GDGFLKFQDSEEVTSQELADAL 741
GD FLKFQDSEE+ S +LADA+
Sbjct: 168 GDEFLKFQDSEELQSHDLADAV 189
>05_07_0334 - 29358823-29360247
Length = 474
Score = 87.0 bits (206), Expect = 2e-17
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Frame = +3
Query: 282 EEFQK---SNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISDDMA 452
EEF + S+ T WAVL+ S ++NYRH A+V Y+ +++ G+ + I++M+ DD+A
Sbjct: 28 EEFLRLPSSDETTRWAVLIAGSNGFYNYRHQADVCHAYQIMRKGGVEEQNIVVMMYDDIA 87
Query: 453 CNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQLLT 632
NP NPRP IFN +VY V DY G +V+V NF+ +L G T +
Sbjct: 88 HNPDNPRPGLIFNHPSGP-DVYA-GVPKDYTGDDVNVNNFLAVLLGNRSALTGSGSGKVV 145
Query: 633 DEGSN--ILIYLTGHG 674
G N + +Y HG
Sbjct: 146 ASGPNDHVFVYYADHG 161
>01_05_0347 +
21226612-21226857,21227623-21227787,21228183-21228339,
21228449-21228534,21228629-21228828,21229659-21229707,
21229786-21229998,21230106-21230312,21230451-21230513,
21230514-21230696
Length = 522
Score = 84.2 bits (199), Expect = 1e-16
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Frame = +3
Query: 315 WAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISDDMACNPRNPRPATIFNS 494
WAVL+ S ++NYRH A+V Y+ +KR G+ D II+ + DD+A NP NPRP I N
Sbjct: 66 WAVLIAGSNGYYNYRHQADVCHAYQIMKRGGLKDENIIVFMYDDIAHNPENPRPGVIIN- 124
Query: 495 AHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQLLTDEGSN--ILIYLTG 668
H Q V DY G EV+V+N +L G S ++L D G N I I+ +
Sbjct: 125 -HPQGGDVYAGVPKDYTGKEVNVKNLFAVLLGNKTAVKGGSGKVL-DSGPNDHIFIFYSD 182
Query: 669 HG 674
HG
Sbjct: 183 HG 184
>06_01_0035 + 358669-359007,359458-359617,359723-360582
Length = 452
Score = 83.4 bits (197), Expect = 2e-16
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Frame = +3
Query: 219 LMLVFIFNLLYLSLSSGIEIPEEFQK---SNHTNNWAVLVDTSRFWFNYRHVANVLSIYR 389
LML+ + + L L +G + +EF + N WA+L+ S+ + NYRH A+V Y+
Sbjct: 8 LMLMLMHLQVGLGLGNG-GLWQEFLRLPTENGGTKWALLIAGSKGYENYRHQADVCHAYQ 66
Query: 390 SVKRLGIPDSQIILMISDDMACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVEN 569
+K+ G+ D I++M+ DD+A NP NP I N + NVY V DY G +V+ N
Sbjct: 67 IMKKGGLKDQNIVVMMYDDIAYNPENPHKGVIINKPNGP-NVYA-GVPKDYNGNDVNKNN 124
Query: 570 FIRLLTGRVPPDTPRSKQLLTDEGSN--ILIYLTGHG 674
F+ +L G+ T + G N I +Y + HG
Sbjct: 125 FLAVLLGKKSALTGAGSGKVISSGPNDHIFVYYSDHG 161
>02_05_0109 -
25909126-25909308,25909454-25909660,25910130-25910336,
25910411-25910459,25911005-25911204,25911275-25911360,
25911441-25911597,25911808-25911972,25913254-25913490
Length = 496
Score = 80.2 bits (189), Expect = 2e-15
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Frame = +3
Query: 267 GIEIPEEFQKSNHTNNWAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISDD 446
G E EE +K WAVLV S + NYRH A+V Y+ +++ G+ + I++ + DD
Sbjct: 47 GSEGTEEEEKDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVFMYDD 106
Query: 447 MACNPRNPRPATIFNSAHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQL 626
+A N NPRP I N + +VY V DY G EV+ +NF +L G T S+++
Sbjct: 107 IANNILNPRPGVIVNHPQGE-DVYA-GVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKV 164
Query: 627 LTDE-GSNILIYLTGHG 674
+ + +I I+ + HG
Sbjct: 165 IDSKPNDHIFIFYSDHG 181
>04_04_0638 -
26877640-26877825,26877954-26878160,26878866-26878925,
26879229-26879435,26879501-26879549,26880138-26880337,
26880425-26880510,26880585-26880741,26880920-26881084,
26881817-26882053
Length = 517
Score = 77.4 bits (182), Expect = 1e-14
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +3
Query: 315 WAVLVDTSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMISDDMACNPRNPRPATIFNS 494
WAVLV S + NYRH A+V Y+ +++ G+ + I++ + DD+A N NPRP TI N
Sbjct: 63 WAVLVAGSSGYGNYRHQADVCHAYQILQKGGVKEENIVVFMYDDIAHNILNPRPGTIINH 122
Query: 495 AHEQINVYGDDVEVDYRGYEVSVENFIRLLTGRVPPDTPRSKQLLTDE-GSNILIYLTGH 671
+ +VY V DY G++V+ ENF +L G T S +++ + +I IY + H
Sbjct: 123 P-KGGDVYA-GVPKDYTGHQVTTENFFAVLLGNKTAVTGGSGKVIDSKPEDHIFIYYSDH 180
Query: 672 G 674
G
Sbjct: 181 G 181
>01_05_0012 +
17147764-17148141,17148316-17148465,17149360-17149729,
17149898-17150015,17150121-17150226,17150326-17150418,
17150498-17150593,17151169-17151891,17152012-17152160,
17153434-17153520,17153541-17153625
Length = 784
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 510 NVYGDDVEVDYRGYEVSVENFIRLLTGRVP-PDTPRSKQLLTDEGSNILIYLTGHG 674
+++G+++ D + + + + +P P P +KQL +D GS++LI T G
Sbjct: 343 SIFGNEMVADGSNFLSASSDLVDTTVQSIPFPHIPLNKQLSSDHGSSLLINETSGG 398
>01_06_0115 +
26585481-26586401,26586501-26586556,26586747-26586876,
26587396-26587506,26587606-26587674,26588125-26588198,
26588446-26588581,26588702-26588795,26588901-26589000,
26589100-26589224,26589597-26589634,26589662-26589742,
26589868-26589972,26590102-26590166,26590371-26590572,
26591073-26591159,26591238-26591294,26591369-26591458,
26591572-26591658,26592204-26592278,26592363-26592463,
26592565-26592655
Length = 964
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 47 SQKLVRMG*VSYAYPMIKHNIKKNKAKEFETSENVSLITWIFLIK*KRKEEENG 208
S+KLV+ A +I+ ++ K+ E E SEN+S F +K + K G
Sbjct: 721 SKKLVQSNGTVAASRLIRKDLPKDSVSEVEISENLSAARCRFYVKKELKRSREG 774
>10_08_0748 - 20277623-20277736,20277956-20279425
Length = 527
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +3
Query: 276 IPEEFQKSNHTNNWAVLVDTSRFWFNYRHVA---NVLSIYRSVK---RLGIPDSQIILMI 437
+ E + KS+ T ++V + F Y H A + L I R V RLG+P + +M
Sbjct: 147 VEEFYSKSSRTGLPPIMVSSDTSKFPYTHGAGSRSALRISRIVSETFRLGLPGVRWFVMG 206
Query: 438 SDDMACNPRN 467
DD P N
Sbjct: 207 DDDTVFLPEN 216
>08_02_1110 + 24371934-24374763,24375034-24375518
Length = 1104
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 582 LTGRVPPDTPRSKQLLTDEGSNILIYLTGHGW*RLPQVSGL 704
LTG +P D PRS Q + D N L + G G LP+++ L
Sbjct: 524 LTGTLPGDLPRSLQFV-DVSDNRLTGVLGAGIGSLPELTKL 563
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,645,036
Number of Sequences: 37544
Number of extensions: 358726
Number of successful extensions: 766
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -