Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K19
         (884 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    31   4.2  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    31   4.2  
U24497-1|AAC50128.1| 4303|Homo sapiens autosomal dominant polycy...    31   7.3  
L43619-1|AAC41765.1| 4292|Homo sapiens polycystic kidney disease...    31   7.3  
L39891-1|AAB59488.1| 3638|Homo sapiens polycystic kidney disease...    31   7.3  
L33243-1|AAC37576.1| 4302|Homo sapiens polycystic kidney disease...    31   7.3  
AC005600-4|AAC34211.1| 1339|Homo sapiens PKD1 protein.                 31   7.3  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -3

Query: 717 SATLPEGRKA--DRYPVSGQGRNRRAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQG 544
           S+TL + R    +R    G+G  + +      G++P    +  GFA+ +   +F +A  G
Sbjct: 561 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 620

Query: 543 GGAYGKTPATRPFYGSWP 490
           G +   +P + P Y S P
Sbjct: 621 GSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -3

Query: 717 SATLPEGRKA--DRYPVSGQGRNRRAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQG 544
           S+TL + R    +R    G+G  + +      G++P    +  GFA+ +   +F +A  G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621

Query: 543 GGAYGKTPATRPFYGSWP 490
           G +   +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639


>U24497-1|AAC50128.1| 4303|Homo sapiens autosomal dominant polycystic
            kidney disease protein 1 protein.
          Length = 4303

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 614  PGVSPWKAPSCALLFRPXPLTGYLSAFLPSGSVALSHSSRCRYLSXVXVGRSXQXWAGCT 793
            PG++ W+ P  A L R   + G     LP+   +L+H      L  V V  +   W G +
Sbjct: 3524 PGLN-WEQPQAARLSRTGLVEGLRKRLLPAWCASLAHGLS---LLLVAVAVAVSGWVGAS 3579

Query: 794  NPP 802
             PP
Sbjct: 3580 FPP 3582


>L43619-1|AAC41765.1| 4292|Homo sapiens polycystic kidney disease 1
            protein protein.
          Length = 4292

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 614  PGVSPWKAPSCALLFRPXPLTGYLSAFLPSGSVALSHSSRCRYLSXVXVGRSXQXWAGCT 793
            PG++ W+ P  A L R   + G     LP+   +L+H      L  V V  +   W G +
Sbjct: 3513 PGLN-WEQPQAARLSRTGLVEGLRKRLLPAWCASLAHGLS---LLLVAVAVAVSGWVGAS 3568

Query: 794  NPP 802
             PP
Sbjct: 3569 FPP 3571


>L39891-1|AAB59488.1| 3638|Homo sapiens polycystic kidney
            disease-associated protein protein.
          Length = 3638

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 614  PGVSPWKAPSCALLFRPXPLTGYLSAFLPSGSVALSHSSRCRYLSXVXVGRSXQXWAGCT 793
            PG++ W+ P  A L R   + G     LP+   +L+H      L  V V  +   W G +
Sbjct: 2859 PGLN-WEQPQAARLSRTGLVEGLRKRLLPAWCASLAHGLS---LLLVAVAVAVSGWVGAS 2914

Query: 794  NPP 802
             PP
Sbjct: 2915 FPP 2917


>L33243-1|AAC37576.1| 4302|Homo sapiens polycystic kidney disease 1
            protein protein.
          Length = 4302

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 614  PGVSPWKAPSCALLFRPXPLTGYLSAFLPSGSVALSHSSRCRYLSXVXVGRSXQXWAGCT 793
            PG++ W+ P  A L R   + G     LP+   +L+H      L  V V  +   W G +
Sbjct: 3523 PGLN-WEQPQAARLSRTGLVEGLRKRLLPAWCASLAHGLS---LLLVAVAVAVSGWVGAS 3578

Query: 794  NPP 802
             PP
Sbjct: 3579 FPP 3581


>AC005600-4|AAC34211.1| 1339|Homo sapiens PKD1 protein.
          Length = 1339

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +2

Query: 614 PGVSPWKAPSCALLFRPXPLTGYLSAFLPSGSVALSHSSRCRYLSXVXVGRSXQXWAGCT 793
           PG++ W+ P  A L R   + G     LP+   +L+H      L  V V  +   W G +
Sbjct: 560 PGLN-WEQPQAARLSRTGLVEGLRKRLLPAWCASLAHGLS---LLLVAVAVAVSGWVGAS 615

Query: 794 NPP 802
            PP
Sbjct: 616 FPP 618


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,478,318
Number of Sequences: 237096
Number of extensions: 2491426
Number of successful extensions: 11103
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11101
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)