Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K17
         (937 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       29   5.3  
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184...    29   5.3  
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    29   7.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   7.0  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    25   8.2  
02_05_1344 + 35823588-35824643                                         28   9.3  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
 Frame = -2

Query: 936 GGGGX--PXPXLGGXXXXPRXWENXXXGGXWEKGPPLXQRGKERXRVXXKXARVGXXGGP 763
           GGGG   P P  GG    PR       GG     PP   RG    R        G  G  
Sbjct: 126 GGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRA 185

Query: 762 XGGXSXGXXP 733
            GG   G  P
Sbjct: 186 PGGGGGGGGP 195


>04_01_0162 +
           1845295-1846317,1846430-1846565,1848436-1848626,
           1848780-1848887,1849001-1849204,1849294-1849525,
           1849602-1849751,1849830-1850007,1850416-1850519,
           1850611-1850933,1851274-1851459,1851672-1851899
          Length = 1020

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 29/103 (28%), Positives = 32/103 (31%), Gaps = 3/103 (2%)
 Frame = +1

Query: 637 FXXXPPPPXXTFKKSGPXXQGGETPXGXXKNPRXXP--P*XPPXWXXXXXXXXXXXXXXX 810
           F   PPP    F  + P  QG   P G    P   P     PP                 
Sbjct: 124 FGTAPPPSQGPFGTAPPPSQG---PFGTAPPPSQGPFAASVPPSQGPFASAQPPFRPPPS 180

Query: 811 XLFSPLGKGGALFPXPPXXXVFPXPGX-GXXPPQXGXWXPPPP 936
            + SP   G A    PP   V P P      PP  G +  PPP
Sbjct: 181 LVQSPTASGMA----PPSAYVRPPPPVQSQPPPMQGFYGGPPP 219


>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
            27505576-27507522,27508478-27508946,27509898-27510079,
            27510746-27511208,27511295-27511691,27511810-27511937,
            27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +1

Query: 649  PPPPXXTFKKSGPXXQGGETPXGXXKNPRXXPP*XPP 759
            PPPP   F   GP   G   P     N    P   PP
Sbjct: 1166 PPPPVAPFHPPGPHFSGPSVPPHHGNNYHQPPSVPPP 1202


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 850 PXPPXXXVFPXPGXGXXPPQXGXWXPPPP 936
           P PP     P P  G  PP      PPPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPP 357


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 24.6 bits (51), Expect(2) = 8.2
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +1

Query: 850 PXPPXXXVFPXPGXGXXPPQXGXWXPPPP 936
           P PP       P     PP  G   PPPP
Sbjct: 281 PPPPPNAPMGMPPRIPPPPVGGTQPPPPP 309



 Score = 22.2 bits (45), Expect(2) = 8.2
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +1

Query: 685 PXXQGGETPXGXXKNPRXXPP*XPP 759
           P    G  P G    PR  PP  PP
Sbjct: 250 PPAAPGTLPNGSGGPPRPPPPQVPP 274


>02_05_1344 + 35823588-35824643
          Length = 351

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +2

Query: 806 LSRSFPLWXRGGPFSXXPPXXXFSQXRGXXXXPPKXGXGXPPPP 937
           + RSFP+W      S  PP       RG     P    G   PP
Sbjct: 7   MGRSFPMWAAADDPSAQPPPFLPPPNRGWKRKNPSTAAGGYQPP 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,212,435
Number of Sequences: 37544
Number of extensions: 297517
Number of successful extensions: 1285
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)