Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_K16
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067618-2|AAC19195.1| 920|Caenorhabditis elegans Nuclear hormo... 33 0.36
U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase ... 30 2.6
U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase ... 30 2.6
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 30 2.6
U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase ... 30 2.6
U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase ... 30 2.6
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 29 3.4
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 29 3.4
AF022970-6|AAB69899.1| 187|Caenorhabditis elegans Hypothetical ... 29 4.5
U00051-15|AAZ91344.1| 270|Caenorhabditis elegans Synaptotagmin ... 29 5.9
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 28 7.8
U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical p... 28 7.8
U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical pr... 28 7.8
U80027-12|AAC48126.2| 493|Caenorhabditis elegans Hypothetical p... 28 7.8
>AF067618-2|AAC19195.1| 920|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 266 protein.
Length = 920
Score = 32.7 bits (71), Expect = 0.36
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +3
Query: 348 KTILCFIQKV*LRAYTMNENISSLTAPISVSTYHQLSLTVE---SANIKNSGLFKPNPYL 518
KT F+ ++ Y NISSL P S + LS T+E + K + + PY
Sbjct: 341 KTFRTFLSELNTIKYIDCLNISSLEMPYSFAEIQSLSSTIEKIPNPTRKVMKILESFPYD 400
Query: 519 QVIIDDKILRKTEVIRNTLHPKWKEDLTILVTPQSQLLFR-LADYH 653
+L E I W + T PQ++ LF+ L D++
Sbjct: 401 VYEAKRNMLTYAESISTNPGSTWMDQQTFAYLPQTRELFQNLTDFY 446
>U82936-1|AAB40869.1| 682|Caenorhabditis elegans protein kinase C2
B isoform protein.
Length = 682
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Frame = +3
Query: 459 LTVESANIKNSGLFKPN----PYLQ--VIIDD---KILRKTEVIRNTLHPKWKEDLTILV 611
LT++ KN PN PY++ +I +D K +KT+ +R TL+P+W E T +
Sbjct: 175 LTIKILEAKNLIPMDPNGLSDPYVKWKLIPEDSGCKSKQKTKTLRATLNPQWNETFTYKL 234
Query: 612 TP 617
P
Sbjct: 235 LP 236
>U82935-1|AAB40868.1| 680|Caenorhabditis elegans protein kinase C2
A isoform protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 9/62 (14%)
Frame = +3
Query: 459 LTVESANIKNSGLFKPN----PYLQ--VIIDD---KILRKTEVIRNTLHPKWKEDLTILV 611
LT++ KN PN PY++ +I +D K +KT+ +R TL+P+W E T +
Sbjct: 175 LTIKILEAKNLIPMDPNGLSDPYVKWKLIPEDSGCKSKQKTKTLRATLNPQWNETFTYKL 234
Query: 612 TP 617
P
Sbjct: 235 LP 236
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 489 SGLFKPNPYLQVIIDD---KILRKTEVIRNTLHPKWKEDLTILVTP 617
+GL P ++I +D K +KT+ +R TL+P+W E T + P
Sbjct: 331 NGLSDPYVKCKLIPEDSGCKSKQKTKTLRATLNPQWNETFTYKLLP 376
>U29376-4|AAM51504.1| 682|Caenorhabditis elegans Protein kinase c
protein 2, isoformb protein.
Length = 682
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 489 SGLFKPNPYLQVIIDD---KILRKTEVIRNTLHPKWKEDLTILVTP 617
+GL P ++I +D K +KT+ +R TL+P+W E T + P
Sbjct: 191 NGLSDPYVKCKLIPEDSGCKSKQKTKTLRATLNPQWNETFTYKLLP 236
>U29376-3|AAM51503.1| 680|Caenorhabditis elegans Protein kinase c
protein 2, isoforma protein.
Length = 680
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 489 SGLFKPNPYLQVIIDD---KILRKTEVIRNTLHPKWKEDLTILVTP 617
+GL P ++I +D K +KT+ +R TL+P+W E T + P
Sbjct: 191 NGLSDPYVKCKLIPEDSGCKSKQKTKTLRATLNPQWNETFTYKLLP 236
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 501 KPNPYLQVIIDDKIL----RKTEVIRNTLHPKWKEDLTILVTPQSQLLFRLAD 647
+P+PY++ + + +KT+V+R T HP + +DL P L R+ +
Sbjct: 1507 QPDPYVKTYVRPDLRNQSKQKTQVVRGTRHPTFNQDLNYTEFPIEILSTRVLE 1559
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 501 KPNPYLQVIIDDKIL----RKTEVIRNTLHPKWKEDLTILVTPQSQLLFRLAD 647
+P+PY++ + + +KT+V+R T HP + +DL P L R+ +
Sbjct: 1507 QPDPYVKTYVRPDLRNQSKQKTQVVRGTRHPTFNQDLNYTEFPIEILSTRVLE 1559
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 546 RKTEVIRNTLHPKWKEDLTILVTPQSQLLFRL 641
+KT V + T+ P+W E L + S + FRL
Sbjct: 61 KKTTVKKKTMAPEWNEHLNVHANESSTISFRL 92
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 546 RKTEVIRNTLHPKWKEDLTILVTPQSQLLFRL 641
+KT V + T+ P+W E L + S + FRL
Sbjct: 61 KKTTVKKKTMAPEWNEHLNVHANESSTISFRL 92
>AF022970-6|AAB69899.1| 187|Caenorhabditis elegans Hypothetical
protein F13A2.5 protein.
Length = 187
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 390 YTMNENISSLTAPISVSTYHQLSLTVESANIKNSG-LFKPNPYLQVIIDDKILRKTEVIR 566
Y+ N + T+PISV Y + +T+ES G + +P Q+ + + L+ ++++
Sbjct: 46 YSSNHLVFEKTSPISVCHYEDVMMTLESEMEGLDGYIASLSPEEQIWVKEDALQNEQLVK 105
Query: 567 NTLHPKWKEDLTILVTPQSQLL 632
+ P +++ T Q+L
Sbjct: 106 EAV-PWMRKEEAQATTKYRQML 126
>U00051-15|AAZ91344.1| 270|Caenorhabditis elegans Synaptotagmin
protein 2 protein.
Length = 270
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +3
Query: 453 LSLTVESAN----IKNSGLFKPNPYLQVIIDDKILRKTEVIRNTLHPKWKE 593
LS+T+ SA+ + +G+ P + V+ + K +T +IRNTL+P + E
Sbjct: 1 LSVTIVSASDLPAMDRNGMSDPYVKVYVLPERKQKFETRIIRNTLNPTYNE 51
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 294 TNSLHMKCLVLR*DHSLNKTILCFIQKV*LRAYTMNENISSLTAPISVSTYHQLSLTVES 473
++S + CLV+ +S+ + IQK+ +R+ M E++ + S STY S ES
Sbjct: 685 SSSAYRDCLVISDGNSMVFGTVDDIQKIHVRSIPMGESVLRIAYQKSTSTYGVCSNRTES 744
>U88167-10|AAB42222.1| 804|Caenorhabditis elegans Hypothetical
protein D2092.1a protein.
Length = 804
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 507 NPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILV 611
+PY++ D I+ K+ I L+P W E+ ++V
Sbjct: 79 DPYVKFRYKDNIVYKSGTIFKNLNPSWDEEFQMIV 113
>U88167-9|AAK68288.1| 890|Caenorhabditis elegans Hypothetical
protein D2092.1b protein.
Length = 890
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 507 NPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILV 611
+PY++ D I+ K+ I L+P W E+ ++V
Sbjct: 165 DPYVKFRYKDNIVYKSGTIFKNLNPSWDEEFQMIV 199
>U80027-12|AAC48126.2| 493|Caenorhabditis elegans Hypothetical
protein T28A11.17 protein.
Length = 493
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 402 ENISSLTAPISVSTYHQLSLTVESANIKNSGLFKPNPYLQVIID-DKILRKTEVIRNTLH 578
EN+ +L ++ Y+ L +E N N + N YL I D K E+ ++L
Sbjct: 123 ENLENLNLTLTNVFYNSLYANIEVLNQLNLPASEENEYLHHIFDLMKNNTIEEIWSSSLS 182
Query: 579 PKWKEDLTILVTPQSQLLFRLADYHS 656
K K++ + +S+++F L DY++
Sbjct: 183 NKSKKEFEKELN-KSKVIFGLLDYNN 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,418,243
Number of Sequences: 27780
Number of extensions: 373556
Number of successful extensions: 812
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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