Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_K14
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 111 8e-25
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 111 8e-25
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 102 4e-22
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 97 1e-20
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 94 1e-19
Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical p... 28 7.3
L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell l... 28 9.6
AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein. 28 9.6
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 111 bits (266), Expect = 8e-25
Identities = 49/95 (51%), Positives = 58/95 (61%)
Frame = +3
Query: 549 MCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLXXXXXXXXXXXXX 728
MC+TY +PT +N R C+E +K D PWFG+EQEY LLD D
Sbjct: 100 MCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPFGWPKNGFPGP 159
Query: 729 XXXYYCGVGANKVFARDFVEAHYRCCLYAGVPIAG 833
YYCGVGANKV+ RD VEAHYR CLYAG+ I+G
Sbjct: 160 QGPYYCGVGANKVYGRDIVEAHYRACLYAGIQISG 194
Score = 81.8 bits (193), Expect = 6e-16
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = +1
Query: 337 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 492
A YIWIDGSGE++R K RT +F P P+ LPIWNFDGSST QA+G +SD YL
Sbjct: 30 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYL 81
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 111 bits (266), Expect = 8e-25
Identities = 49/95 (51%), Positives = 58/95 (61%)
Frame = +3
Query: 549 MCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLXXXXXXXXXXXXX 728
MC+TY +PT +N R C+E +K D PWFG+EQEY LLD D
Sbjct: 103 MCETYDNKKKPTATNYRQRCKEVMEKAADQHPWFGMEQEYTLLDIDGHPFGWPKNGFPGP 162
Query: 729 XXXYYCGVGANKVFARDFVEAHYRCCLYAGVPIAG 833
YYCGVGANKV+ RD VEAHYR CLYAG+ I+G
Sbjct: 163 QGPYYCGVGANKVYGRDIVEAHYRACLYAGIQISG 197
Score = 81.8 bits (193), Expect = 6e-16
Identities = 35/52 (67%), Positives = 41/52 (78%)
Frame = +1
Query: 337 ATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 492
A YIWIDGSGE++R K RT +F P P+ LPIWNFDGSST QA+G +SD YL
Sbjct: 33 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYL 84
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 102 bits (244), Expect = 4e-22
Identities = 42/95 (44%), Positives = 57/95 (60%)
Frame = +3
Query: 549 MCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLXXXXXXXXXXXXX 728
MCDT + M+PT +N+R C E K D +PWFG+EQEY+++D D
Sbjct: 102 MCDTLDHEMKPTATNHRQMCAELMKKVSDQQPWFGMEQEYLIVDRDEHPLGWPKHGYPAP 161
Query: 729 XXXYYCGVGANKVFARDFVEAHYRCCLYAGVPIAG 833
YYCG+GA++ F R+ VE HYR CL+AG+ I G
Sbjct: 162 QGKYYCGIGADRAFGREVVETHYRACLHAGITIFG 196
Score = 88.6 bits (210), Expect = 5e-18
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = +1
Query: 277 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 456
L + + + LP K ATY+WIDG+GEHLR K RT+N P+ + PIWN+DGSST
Sbjct: 12 LGQATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSST 71
Query: 457 NQADGHNSDTYL 492
QADG NSD YL
Sbjct: 72 GQADGLNSDRYL 83
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 97.5 bits (232), Expect = 1e-20
Identities = 40/95 (42%), Positives = 58/95 (61%)
Frame = +3
Query: 549 MCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLXXXXXXXXXXXXX 728
+C+T ++ +P +N R C + +K KD EPWFG+EQE+ LL +D
Sbjct: 103 LCETLTHDNKPHPTNTRQQCVDNMEKAKDQEPWFGMEQEFTLLGADKHPYNWPVNGFPAP 162
Query: 729 XXXYYCGVGANKVFARDFVEAHYRCCLYAGVPIAG 833
YYCGVG+++VF R +EAHYR C+YAG+ I+G
Sbjct: 163 QGPYYCGVGSDRVFGRHILEAHYRACMYAGIKISG 197
Score = 71.7 bits (168), Expect = 6e-13
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +1
Query: 343 YIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSSTNQADGHNSDTYL 492
YIWID + E++R K +T +F PK P DLPIWNFDG+ST Q+ G SD Y+
Sbjct: 35 YIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYI 84
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 96.3 bits (229), Expect = 2e-20
Identities = 40/95 (42%), Positives = 57/95 (60%)
Frame = +3
Query: 549 MCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLXXXXXXXXXXXXX 728
MCDT + M+PT +++R +C E + +D PWFG+EQEY+++D D
Sbjct: 102 MCDTLDHQMQPTATSHRQACAEIMHEIRDTRPWFGMEQEYLIVDRDEHPLGWPKHGFPDP 161
Query: 729 XXXYYCGVGANKVFARDFVEAHYRCCLYAGVPIAG 833
YYC VGA++ F R+ VE HYR CL+AG+ I G
Sbjct: 162 QGKYYCSVGADRAFGREVVETHYRACLHAGLNIFG 196
Score = 82.2 bits (194), Expect = 4e-16
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = +1
Query: 277 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 456
L ++ ++ L KI ATY+WIDG+GE+LR K RT + +PK +D PIWN+DGSST
Sbjct: 12 LGTAVIDQFLGLRPHPTKIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSST 71
Query: 457 NQADGHNSDTYL 492
QA G +SD YL
Sbjct: 72 GQAKGRDSDRYL 83
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 94.3 bits (224), Expect = 1e-19
Identities = 40/95 (42%), Positives = 55/95 (57%)
Frame = +3
Query: 549 MCDTYKYNMEPTESNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLXXXXXXXXXXXXX 728
MC+T M+PT +N+R +C K + PWFG+EQEY+++D D
Sbjct: 102 MCETLDETMKPTATNHRQNCAAIMKKVAEHHPWFGMEQEYLIVDRDEHPLGWPKHGYPAP 161
Query: 729 XXXYYCGVGANKVFARDFVEAHYRCCLYAGVPIAG 833
YYCGVGA++ F R+ VE HYR CL+AG+ I G
Sbjct: 162 QGKYYCGVGADRAFGREVVETHYRACLHAGINIFG 196
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/72 (51%), Positives = 46/72 (63%)
Frame = +1
Query: 277 LSKTLLSRYNDLPLPADKILATYIWIDGSGEHLRCKDRTLNFIPKAPKDLPIWNFDGSST 456
L + + + LP K ATY+WIDG+GE LR K RT N P+ + PIWN+DGSST
Sbjct: 12 LGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSST 71
Query: 457 NQADGHNSDTYL 492
QA+G NSD YL
Sbjct: 72 GQAEGLNSDRYL 83
>Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical
protein C06A12.4 protein.
Length = 735
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +3
Query: 516 IHSVEEITSSXMCDTYKYNMEPTESNNRISCQEAYDKCKD 635
IHSVE S M + +N+ P SNN DKCK+
Sbjct: 405 IHSVERPGSGLMMEILDHNLMPFISNNETQEDTLLDKCKE 444
>Z74038-8|CAD21642.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 632 LAFVVSFLTTDAIVALCWLH 573
LA V+SFLT AI+ L +LH
Sbjct: 237 LALVISFLTVPAIIMLAFLH 256
>Z72507-16|CAC35887.1| 540|Caenorhabditis elegans Hypothetical
protein F17C11.12 protein.
Length = 540
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 632 LAFVVSFLTTDAIVALCWLH 573
LA V+SFLT AI+ L +LH
Sbjct: 237 LALVISFLTVPAIIMLAFLH 256
>L23648-7|AAA28031.2| 962|Caenorhabditis elegans Abnormal cell
lineage protein 36 protein.
Length = 962
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 697 SGGPRVVSPHRKGHTTAVSVPTKSLPETLSKPT 795
S PR H KG + S P + +PETLS+ T
Sbjct: 93 SSQPREEIIHGKGESVYSSFPCQVIPETLSRMT 125
>AF104917-1|AAD22772.1| 962|Caenorhabditis elegans LIN-36 protein.
Length = 962
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 697 SGGPRVVSPHRKGHTTAVSVPTKSLPETLSKPT 795
S PR H KG + S P + +PETLS+ T
Sbjct: 93 SSQPREEIIHGKGESVYSSFPCQVIPETLSRMT 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,585,809
Number of Sequences: 27780
Number of extensions: 430700
Number of successful extensions: 1163
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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