Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K12
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41030-7|AAP31440.1|  250|Caenorhabditis elegans Hypothetical pr...    62   7e-10
U41030-6|AAA82365.1|  375|Caenorhabditis elegans Hypothetical pr...    62   7e-10
AL117207-5|CAB60395.1|  375|Caenorhabditis elegans Hypothetical ...    56   2e-08
AL032640-3|CAA21641.2|  424|Caenorhabditis elegans Hypothetical ...    30   2.5  
AF077545-2|AAC26305.3|  356|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U46671-7|AAA85752.1|  194|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>U41030-7|AAP31440.1|  250|Caenorhabditis elegans Hypothetical
           protein C44C1.5b protein.
          Length = 250

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
 Frame = +1

Query: 325 LNEAYFPTRLWGFSGHVQTILHSLIGRVRCPWPIGGRISLVLPDKSTLTYDLYEPVGSEH 504
           L + Y P+  W   G  QT++  +     CP     R  +   D      D   P G++ 
Sbjct: 49  LEQKYHPS-WWCPFGTTQTVVRQIFRD--CPSLPFTREIVEFDDGGAAGIDWLIPEGADD 105

Query: 505 EDDVTVAICPGI-GNTSESVYIRTYVHYSQCHGYRCAVLNHIGALHSVPVTGNRIFSYGH 681
              + V + PGI G+T +S Y+   V  ++  G++C V+N  G L  V +   R ++   
Sbjct: 106 TTPIVVFL-PGITGSTHDSSYVLHPVKEARDKGWKCVVVNPRG-LGGVKLRTTRTYNAAT 163

Query: 682 TDDFNYMIENLMERYPNTKLILVGFSLGGNLITKYL 789
             DF ++ + + ERYP+ K +  GFS+GG ++  YL
Sbjct: 164 PHDFAFIAKMINERYPDAKKLGCGFSMGGMILWNYL 199


>U41030-6|AAA82365.1|  375|Caenorhabditis elegans Hypothetical
           protein C44C1.5a protein.
          Length = 375

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
 Frame = +1

Query: 325 LNEAYFPTRLWGFSGHVQTILHSLIGRVRCPWPIGGRISLVLPDKSTLTYDLYEPVGSEH 504
           L + Y P+  W   G  QT++  +     CP     R  +   D      D   P G++ 
Sbjct: 49  LEQKYHPS-WWCPFGTTQTVVRQIFRD--CPSLPFTREIVEFDDGGAAGIDWLIPEGADD 105

Query: 505 EDDVTVAICPGI-GNTSESVYIRTYVHYSQCHGYRCAVLNHIGALHSVPVTGNRIFSYGH 681
              + V + PGI G+T +S Y+   V  ++  G++C V+N  G L  V +   R ++   
Sbjct: 106 TTPIVVFL-PGITGSTHDSSYVLHPVKEARDKGWKCVVVNPRG-LGGVKLRTTRTYNAAT 163

Query: 682 TDDFNYMIENLMERYPNTKLILVGFSLGGNLITKYL 789
             DF ++ + + ERYP+ K +  GFS+GG ++  YL
Sbjct: 164 PHDFAFIAKMINERYPDAKKLGCGFSMGGMILWNYL 199


>AL117207-5|CAB60395.1|  375|Caenorhabditis elegans Hypothetical
           protein Y60A3A.7 protein.
          Length = 375

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
 Frame = +1

Query: 325 LNEAYFPTRLWGFSGHVQTILHSLIGRVRCPWPIGGRISLVLPDKSTLTYDLYEPVGSEH 504
           L + Y P+  W   G  QTI+  +     CP     R  +   D      D   P G++ 
Sbjct: 49  LEQKYHPS-WWCPFGTTQTIVRQVFRD--CPTLPFKREIVEFSDGGAAGIDWLIPEGAD- 104

Query: 505 EDDVTVAICPGI-GNTSESVYIRTYVHYSQCHGYRCAVLNHIGALHSVPVTGNRIFSYGH 681
           +D   V   PGI G+T +  Y+   V  ++  G+R  V+N  G L  V +  +R ++   
Sbjct: 105 DDAPIVVFLPGITGSTHDCSYVLHPVMEARDKGWRSVVVNQRG-LGGVKLKNSRTYNAAS 163

Query: 682 TDDFNYMIENLMERYPNTKLILVGFSLGGNLITKYL 789
            +D  ++ + + ER+P  +    GFS+GG ++  YL
Sbjct: 164 CEDLEFICKMIKERFPKARKFGCGFSMGGMILWNYL 199


>AL032640-3|CAA21641.2|  424|Caenorhabditis elegans Hypothetical
           protein Y43F8A.3 protein.
          Length = 424

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +1

Query: 694 NYMIENLMERYP--NTKLILVGFSLGGNLIT 780
           +Y +EN +E++     K+ILVG S GGNL T
Sbjct: 180 DYFLENSLEKFKIDPKKVILVGDSAGGNLAT 210


>AF077545-2|AAC26305.3|  356|Caenorhabditis elegans Hypothetical
           protein H41C03.2 protein.
          Length = 356

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +1

Query: 691 FNYMIENLMERYPNTKLILVGFSLGGNLIT 780
           F+  +E +++ YP+  +++ G SLGG + T
Sbjct: 204 FDASLEKVVQEYPSYSMLITGHSLGGAMAT 233


>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
            R09E10.7 protein.
          Length = 1717

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 723  LPQYKVDSSRFQPWRQFNHKIPG 791
            L Q+  DS+R+ P R FN  +PG
Sbjct: 1559 LHQFATDSARYFPHRMFNQNLPG 1581


>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
            F22G12.5 protein.
          Length = 2396

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +1

Query: 556  SVYIRTYVHYSQCHGYRCAVLNHIGALHSVPVTGNRIFSYGHTDDFNY 699
            SVY      YS+    R +   H+GA   V   G R F   H  D+ Y
Sbjct: 2050 SVYAELQQTYSRAAEVRSSGKRHLGAYFRVRFNGERHFGSEHNTDWIY 2097


>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
            F22G12.5 protein.
          Length = 2396

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +1

Query: 556  SVYIRTYVHYSQCHGYRCAVLNHIGALHSVPVTGNRIFSYGHTDDFNY 699
            SVY      YS+    R +   H+GA   V   G R F   H  D+ Y
Sbjct: 2050 SVYAELQQTYSRAAEVRSSGKRHLGAYFRVRFNGERHFGSEHNTDWIY 2097


>U46671-7|AAA85752.1|  194|Caenorhabditis elegans Hypothetical
           protein C14E2.6 protein.
          Length = 194

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 691 FNYMIENLMERYPNTKLILVGFSLGGNLITKY 786
           F+  +E+ + R+P+   ++ G SLGG + T +
Sbjct: 41  FDKAVEDAVGRFPSYSFLMTGHSLGGAMTTVF 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,347,282
Number of Sequences: 27780
Number of extensions: 457829
Number of successful extensions: 1207
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)