Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_K10
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical p... 60 2e-09
Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical pr... 60 2e-09
X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein. 60 2e-09
X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein. 60 2e-09
M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein. 45 8e-05
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 42 5e-04
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 42 5e-04
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 42 5e-04
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 42 6e-04
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 42 6e-04
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 42 6e-04
AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical ... 39 0.004
AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain p... 39 0.004
Z77133-4|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 39 0.006
AY205144-1|AAO46042.2| 201|Caenorhabditis elegans NK-2 family h... 39 0.006
U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal ... 38 0.010
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 37 0.017
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 37 0.017
Z81036-4|CAB02740.2| 134|Caenorhabditis elegans Hypothetical pr... 37 0.022
X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodom... 37 0.022
AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans hom... 37 0.022
Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical pr... 36 0.030
AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative tran... 36 0.030
L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protei... 36 0.039
L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeo... 36 0.039
Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical p... 36 0.052
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 36 0.052
AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein. 36 0.052
AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein. 36 0.052
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 35 0.069
AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans hom... 35 0.069
AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans hom... 35 0.069
X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein. 35 0.091
L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protei... 35 0.091
L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying defe... 35 0.091
L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying defe... 35 0.091
L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying defe... 35 0.091
AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical ... 34 0.12
AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical ... 34 0.12
AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain p... 34 0.12
Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical pr... 34 0.16
X52810-1|CAB57215.1| 67|Caenorhabditis elegans protein ( Caeno... 34 0.16
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 34 0.16
U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeo... 34 0.16
U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal line... 34 0.16
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 34 0.16
Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical pr... 33 0.37
U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeo... 33 0.37
AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain p... 33 0.37
AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain p... 33 0.37
AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain p... 33 0.37
AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans hom... 33 0.37
Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical pr... 32 0.48
AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein. 32 0.48
AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. 32 0.48
X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein ( Caeno... 32 0.64
Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protei... 31 1.1
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 31 1.1
U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeo... 31 1.1
U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeo... 31 1.1
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 31 1.1
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 31 1.1
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical pr... 30 2.0
X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein. 30 2.0
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 30 2.0
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 30 2.6
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 30 2.6
Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z11794-1|CAA77837.1| 66|Caenorhabditis elegans ceh16-1 protein... 29 3.4
X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein. 29 3.4
U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 29 3.4
AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein. 29 3.4
AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 29 3.4
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 29 4.5
U41553-6|AAO91696.1| 297|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical pr... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical pr... 29 6.0
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 6.0
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 29 6.0
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p... 29 6.0
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 29 6.0
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 6.0
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 6.0
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical p... 28 7.9
Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical p... 28 7.9
U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeo... 28 7.9
U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein. 28 7.9
>Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical
protein C38D4.6b protein.
Length = 268
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +1
Query: 553 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+ RT DKYR+VYSD+QRLELEKEFH S +IT RK++L+ L
Sbjct: 200 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTML 241
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L L+ERQ+KIWFQNRRA + QK
Sbjct: 241 LSLTERQIKIWFQNRRAKDRRDKQK 265
>Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical
protein C38D4.6a protein.
Length = 270
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +1
Query: 553 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+ RT DKYR+VYSD+QRLELEKEFH S +IT RK++L+ L
Sbjct: 202 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTML 243
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L L+ERQ+KIWFQNRRA + QK
Sbjct: 243 LSLTERQIKIWFQNRRAKDRRDKQK 267
>X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein.
Length = 208
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +1
Query: 553 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+ RT DKYR+VYSD+QRLELEKEFH S +IT RK++L+ L
Sbjct: 140 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTML 181
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L L+ERQ+KIWFQNRRA + QK
Sbjct: 181 LSLTERQIKIWFQNRRAKDRRDKQK 205
>X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein.
Length = 71
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +1
Query: 553 KTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+ RT DKYR+VYSD+QRLELEKEFH S +IT RK++L+ L
Sbjct: 5 RVRTADKYRMVYSDYQRLELEKEFHTSPFITSDRKSQLSTML 46
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L L+ERQ+KIWFQNRRA + QK
Sbjct: 46 LSLTERQIKIWFQNRRAKDRRDKQK 70
>M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein.
Length = 60
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +1
Query: 571 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGSLGTTGKNLV 711
+ R Y+ +Q LELEKEFH +Y+T +R+ E+A SL G+NLV
Sbjct: 3 RQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQGQNLV 49
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 577 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
R YS Q LELEKEFHY +Y+T +R+ E++ +L
Sbjct: 132 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETL 165
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
L L+ERQVKIWFQNRR K+ ++
Sbjct: 165 LHLTERQVKIWFQNRRMKHKKEAK 188
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 577 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
R YS Q LELEKEFHY +Y+T +R+ E++ +L
Sbjct: 121 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETL 154
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
L L+ERQVKIWFQNRR K+ ++
Sbjct: 154 LHLTERQVKIWFQNRRMKHKKEAK 177
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 577 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
R YS Q LELEKEFHY +Y+T +R+ E++ +L
Sbjct: 121 RQTYSRSQTLELEKEFHYHKYLTRKRRQEISETL 154
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
L L+ERQVKIWFQNRR K+ ++
Sbjct: 154 LHLTERQVKIWFQNRRMKHKKEAK 177
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 556 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+R + + R Y+ +Q LELEKEFH +Y+T +R+ E+A SL
Sbjct: 162 SRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSL 202
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 674 ALGLSERQVKIWFQNRRAXXKEASQ 748
+L L+ERQVKIWFQNRR K+ ++
Sbjct: 201 SLMLTERQVKIWFQNRRMKHKKENK 225
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 556 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+R + + R Y+ +Q LELEKEFH +Y+T +R+ E+A SL
Sbjct: 162 SRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSL 202
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 674 ALGLSERQVKIWFQNRRAXXKEASQ 748
+L L+ERQVKIWFQNRR K+ ++
Sbjct: 201 SLMLTERQVKIWFQNRRMKHKKENK 225
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +1
Query: 556 TRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+R + + R Y+ +Q LELEKEFH +Y+T +R+ E+A SL
Sbjct: 162 SRGEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSL 202
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 674 ALGLSERQVKIWFQNRRAXXKEASQ 748
+L L+ERQVKIWFQNRR K+ ++
Sbjct: 201 SLMLTERQVKIWFQNRRMKHKKENK 225
>AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical
protein Y75B8A.1 protein.
Length = 275
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT 754
L L+ERQVKIWFQNRR K+ Q+T
Sbjct: 236 LHLTERQVKIWFQNRRMKDKKQKQRT 261
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 571 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELA 669
K R Y+ Q LELEKEF Y+ Y++ +++ ELA
Sbjct: 201 KKRKPYTKAQTLELEKEFLYNTYVSKQKRWELA 233
>AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain
protein PHP-3 protein.
Length = 275
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT 754
L L+ERQVKIWFQNRR K+ Q+T
Sbjct: 236 LHLTERQVKIWFQNRRMKDKKQKQRT 261
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 571 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELA 669
K R Y+ Q LELEKEF Y+ Y++ +++ ELA
Sbjct: 201 KKRKPYTKAQTLELEKEFLYNTYVSKQKRWELA 233
>Z77133-4|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1
Query: 565 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGSLGTTGK 702
K K RV+++ HQ ELE+ F RY+T + ELA LG T K
Sbjct: 135 KRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVK 180
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
LGL+ QVKIWFQNRR K +Q
Sbjct: 172 LGLTATQVKIWFQNRRYKCKRLAQ 195
>AY205144-1|AAO46042.2| 201|Caenorhabditis elegans NK-2 family
homeodomain proteinCEH-28 protein.
Length = 201
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1
Query: 565 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGSLGTTGK 702
K K RV+++ HQ ELE+ F RY+T + ELA LG T K
Sbjct: 104 KRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVK 149
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
LGL+ QVKIWFQNRR K +Q
Sbjct: 141 LGLTATQVKIWFQNRRYKCKRLAQ 164
>U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal
protein 1 protein.
Length = 197
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 671 SALGLSERQVKIWFQNRRAXXKEASQKT*RGGDEGKG 781
+AL LSE QVK WFQNRR K+ +K D+ G
Sbjct: 155 NALNLSETQVKTWFQNRRMKHKKVVRKDDNSVDDDNG 191
Score = 31.5 bits (68), Expect = 0.85
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 562 TKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
++ K R V+SD Q LE+ F RY++ + ELA +L
Sbjct: 119 SRRKARTVFSDQQLQGLERRFESQRYLSTPERIELANAL 157
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT*R 760
LGL+E Q+KIWFQN+RA K+++ R
Sbjct: 124 LGLNESQIKIWFQNKRAKLKKSTSSVPR 151
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 454 WMKKPNYQTQPNPGRSPQPEQMQVMLHDKNFPCKTRTKDKYRVVYSDHQRLELEKEFHYS 633
W+ Y +P+ G + + + + + + R ++ Q L+ EF S
Sbjct: 53 WVFSTRYSDRPSAGPRHRKSRKRESTGSSG---SSEEEKRPRTAFTGDQLDRLKTEFRES 109
Query: 634 RYITIRRKAELAVSLG 681
RY+T +R+ ELA LG
Sbjct: 110 RYLTEKRRQELAHELG 125
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT*R 760
LGL+E Q+KIWFQN+RA K+++ R
Sbjct: 124 LGLNESQIKIWFQNKRAKLKKSTSSVPR 151
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 454 WMKKPNYQTQPNPGRSPQPEQMQVMLHDKNFPCKTRTKDKYRVVYSDHQRLELEKEFHYS 633
W+ Y +P+ G + + + + + + R ++ Q L+ EF S
Sbjct: 53 WVFSTRYSDRPSAGPRHRKSRKRESTGSSG---SSEEEKRPRTAFTGDQLDRLKTEFRES 109
Query: 634 RYITIRRKAELAVSLG 681
RY+T +R+ ELA LG
Sbjct: 110 RYLTEKRRQELAHELG 125
>Z81036-4|CAB02740.2| 134|Caenorhabditis elegans Hypothetical
protein C16C2.1 protein.
Length = 134
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 674 ALGLSERQVKIWFQNRRAXXKEASQK 751
+LGLS+ QVK+WFQNRR K+ +
Sbjct: 71 SLGLSDNQVKVWFQNRRTKQKKIDSR 96
>X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodomain
protein protein.
Length = 202
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 577 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
R ++ HQ ELEKEFH ++Y+ R+ E+A +L
Sbjct: 118 RTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNL 151
Score = 33.9 bits (74), Expect = 0.16
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Frame = +2
Query: 530 STTKIFHVKRALKTNTAWCTVIISGWSSRRNFTT-VVTSLFA-------VKRN*----PS 673
+T K H KR+ + VI ++R NFTT +T L V R S
Sbjct: 90 NTYKWMHTKRSQRPAAPKKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIAS 149
Query: 674 ALGLSERQVKIWFQNRRAXXKEASQK 751
L L E QVKIWFQNRR K+ ++
Sbjct: 150 NLKLQEAQVKIWFQNRRMKEKKREKE 175
>AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans
homeobox protein 13 protein.
Length = 202
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 577 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
R ++ HQ ELEKEFH ++Y+ R+ E+A +L
Sbjct: 118 RTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNL 151
Score = 33.9 bits (74), Expect = 0.16
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Frame = +2
Query: 530 STTKIFHVKRALKTNTAWCTVIISGWSSRRNFTT-VVTSLFA-------VKRN*----PS 673
+T K H KR+ + VI ++R NFTT +T L V R S
Sbjct: 90 NTYKWMHTKRSQRPAAPKKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIAS 149
Query: 674 ALGLSERQVKIWFQNRRAXXKEASQK 751
L L E QVKIWFQNRR K+ ++
Sbjct: 150 NLKLQEAQVKIWFQNRRMKEKKREKE 175
>Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical
protein C28A5.4 protein.
Length = 273
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
LGLS+ QVKIWFQNRR+ K+
Sbjct: 139 LGLSQTQVKIWFQNRRSKQKK 159
>AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative
transcription factor protein.
Length = 278
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
LGLS+ QVKIWFQNRR+ K+
Sbjct: 144 LGLSQTQVKIWFQNRRSKQKK 164
>L19249-1|AAC37167.1| 303|Caenorhabditis elegans homeobox protein
protein.
Length = 303
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 650 AVKRN*PSALGLSERQVKIWFQNRRAXXKEASQK 751
A + N LGLS QV+IWFQNRR+ + Q+
Sbjct: 237 AERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQE 270
>L14429-3|AAA28218.1| 305|Caenorhabditis elegans C.elegans homeobox
protein 23 protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 650 AVKRN*PSALGLSERQVKIWFQNRRAXXKEASQK 751
A + N LGLS QV+IWFQNRR+ + Q+
Sbjct: 239 AERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQE 272
>Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical
protein R07B1.1 protein.
Length = 225
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 608 SSRRNFTTVVTSLFAVKRN*PSALGLSERQVKIWFQNRRAXXKEASQ 748
S R F + A + ++L L+E QVKIWFQNRRA K +
Sbjct: 143 SLERKFQSKQYLSIAERAEFSASLQLTETQVKIWFQNRRAKSKRLQE 189
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective pharynx
development protein2 protein.
Length = 225
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 674 ALGLSERQVKIWFQNRRA 727
+L LSERQVK WFQNRRA
Sbjct: 171 SLSLSERQVKTWFQNRRA 188
>AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein.
Length = 170
Score = 35.5 bits (78), Expect = 0.052
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 674 ALGLSERQVKIWFQNRRA 727
+L LSERQVK WFQNRRA
Sbjct: 116 SLSLSERQVKTWFQNRRA 133
>AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein.
Length = 225
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 608 SSRRNFTTVVTSLFAVKRN*PSALGLSERQVKIWFQNRRAXXKEASQ 748
S R F + A + ++L L+E QVKIWFQNRRA K +
Sbjct: 143 SLERKFQSKQYLSIAERAEFSASLQLTETQVKIWFQNRRAKSKRLQE 189
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 35.1 bits (77), Expect = 0.069
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRAXXKEASQKT*RGGDEGK 778
GLS R V++WFQN+RA K+ ++K GD K
Sbjct: 201 GLSVRVVQVWFQNQRAKIKKLNKKDSDSGDTFK 233
>AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans
homeobox protein 12 protein.
Length = 180
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT 754
L LSE Q+KIWFQNRR K T
Sbjct: 147 LSLSETQIKIWFQNRRMKNKRCPSST 172
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 577 RVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGSLGTT 696
R +S Q ++LEK+F +RY++ R+ +LA L SL T
Sbjct: 114 RTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQL-SLSET 152
>AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans
homeobox protein 9 protein.
Length = 147
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT*RGGD 769
L ++E QVKIWFQNRR K+ + R G+
Sbjct: 107 LDVTETQVKIWFQNRRTKWKKIESEKERSGE 137
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 550 CKTRTKDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
C+ + K R +S Q ELEK+F +Y++ ++ELA L
Sbjct: 65 CQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRL 107
>X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein.
Length = 75
Score = 34.7 bits (76), Expect = 0.091
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQK 751
L++RQ+KIWFQNRR K+ Q+
Sbjct: 41 LTDRQIKIWFQNRRMKAKKEKQR 63
>L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protein
protein.
Length = 223
Score = 34.7 bits (76), Expect = 0.091
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQK 751
L++RQ+KIWFQNRR K+ Q+
Sbjct: 151 LTDRQIKIWFQNRRMKAKKEKQR 173
>L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying
defective protein 5,isoform c protein.
Length = 222
Score = 34.7 bits (76), Expect = 0.091
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQK 751
L++RQ+KIWFQNRR K+ Q+
Sbjct: 150 LTDRQIKIWFQNRRMKAKKEKQR 172
>L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying
defective protein 5,isoform a protein.
Length = 219
Score = 34.7 bits (76), Expect = 0.091
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQK 751
L++RQ+KIWFQNRR K+ Q+
Sbjct: 147 LTDRQIKIWFQNRRMKAKKEKQR 169
>L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying
defective protein 5,isoform b protein.
Length = 223
Score = 34.7 bits (76), Expect = 0.091
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQK 751
L++RQ+KIWFQNRR K+ Q+
Sbjct: 151 LTDRQIKIWFQNRRMKAKKEKQR 173
>AL132853-1|CAB60440.1| 234|Caenorhabditis elegans Hypothetical
protein Y80D3A.3 protein.
Length = 234
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 605 WSSRRNFTTVVTSLFAVKRN*PSALGLSERQVKIWFQNRRAXXKEASQK 751
++ R F T +R + +GLS Q+KIWFQNRR ++ K
Sbjct: 160 YALRTRFEQCDTIKVDERRKLGAVIGLSPEQIKIWFQNRRFKLRKEKYK 208
>AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical
protein Y75B8A.2b protein.
Length = 218
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L L E+QVK+WFQNRR K+ Q+
Sbjct: 174 LMLDEKQVKVWFQNRRMKDKKLRQR 198
>AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain
protein NOB-1A protein.
Length = 218
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L L E+QVK+WFQNRR K+ Q+
Sbjct: 174 LMLDEKQVKVWFQNRRMKDKKLRQR 198
>Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical
protein R06F6.6 protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 674 ALGLSERQVKIWFQNRRAXXK 736
+L LSE QVK WFQNRRA K
Sbjct: 166 SLKLSENQVKTWFQNRRAKDK 186
>X52810-1|CAB57215.1| 67|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-1 gene, unknown homeobox. ).
Length = 67
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L LSE QVKIWFQNRR K+
Sbjct: 38 LQLSETQVKIWFQNRRTKWKK 58
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 671 SALGLSERQVKIWFQNRRAXXKEASQKT*RGGDEG 775
S GLS+R ++WFQN RA K+ QK+ GD G
Sbjct: 274 SMTGLSKRVTQVWFQNSRARQKKWHQKS--EGDNG 306
>U55376-2|AAA98004.1| 132|Caenorhabditis elegans C.elegans homeobox
protein 1 protein.
Length = 132
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L LSE QVKIWFQNRR K+
Sbjct: 38 LQLSETQVKIWFQNRRTKWKK 58
>U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal lineage
specificationprotein 2 protein.
Length = 341
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 656 KRN*PSALGLSERQVKIWFQNRRAXXKEASQ 748
+ N L L+E QVKIWFQNRR K +Q
Sbjct: 231 RSNLAQKLHLTETQVKIWFQNRRNKFKRQAQ 261
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 671 SALGLSERQVKIWFQNRRAXXKEASQKT*RGGDEG 775
S GLS+R ++WFQN RA K+ QK+ GD G
Sbjct: 274 SMTGLSKRVTQVWFQNSRARQKKWHQKS--EGDNG 306
>Z66494-8|CAA91264.1| 84|Caenorhabditis elegans Hypothetical
protein C34C6.8 protein.
Length = 84
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L L E QVKIWFQNRR + + K
Sbjct: 60 LSLDEYQVKIWFQNRRIRMRREANK 84
>U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeobox
protein 31 protein.
Length = 223
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 571 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSLGSLGT 693
K R +++D Q ELE F +Y++++ + ELA +G T
Sbjct: 40 KARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDT 80
>AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 32.7 bits (71), Expect = 0.37
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXK 736
L L+E QVK+WFQNRR K
Sbjct: 163 LSLTETQVKVWFQNRRTKHK 182
>AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 32.7 bits (71), Expect = 0.37
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXK 736
L L+E QVK+WFQNRR K
Sbjct: 163 LSLTETQVKVWFQNRRTKHK 182
>AF091459-1|AAC36745.1| 84|Caenorhabditis elegans homeodomain
protein CEH-7 protein.
Length = 84
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L L E QVKIWFQNRR + + K
Sbjct: 60 LSLDEYQVKIWFQNRRIRMRREANK 84
>AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans
homeobox protein 2 protein.
Length = 209
Score = 32.7 bits (71), Expect = 0.37
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXK 736
L L+E QVK+WFQNRR K
Sbjct: 163 LSLTETQVKVWFQNRRTKHK 182
>Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical
protein R03C1.3b protein.
Length = 106
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L +SE QVK+WFQNRR ++
Sbjct: 56 LNMSESQVKVWFQNRRTKWRK 76
>Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical
protein R03C1.3a protein.
Length = 256
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L +SE QVK+WFQNRR ++
Sbjct: 206 LNMSESQVKVWFQNRRTKWRK 226
>AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein.
Length = 106
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L +SE QVK+WFQNRR ++
Sbjct: 56 LNMSESQVKVWFQNRRTKWRK 76
>AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein.
Length = 256
Score = 32.3 bits (70), Expect = 0.48
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L +SE QVK+WFQNRR ++
Sbjct: 206 LNMSESQVKVWFQNRRTKWRK 226
>X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-9 gene, unknown homeobox. ).
Length = 60
Score = 31.9 bits (69), Expect = 0.64
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L ++E QVKIWFQNRR K+
Sbjct: 38 LDVTETQVKIWFQNRRTKWKK 58
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 565 KDKYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+ K R +S Q ELEK+F +Y++ ++ELA L
Sbjct: 1 RKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRL 38
>Z81085-1|CAB03112.3| 263|Caenorhabditis elegans Hypothetical
protein F46F3.1 protein.
Length = 263
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 650 AVKRN*PSALGLSERQVKIWFQNRRAXXK-EASQKT*RGG 766
A + N ++ LS QVKIWFQN+R K + +K GG
Sbjct: 126 ADRENLAKSINLSATQVKIWFQNQRYKCKRQEKEKKMDGG 165
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 571 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
K RV++S Q ELE+ F ++Y+T + +LA S+
Sbjct: 152 KRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSI 187
>Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protein
protein.
Length = 130
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L L+E Q+K WFQNRR K+
Sbjct: 62 LNLTETQIKTWFQNRRTKWKK 82
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 653 VKRN*PSALGLSERQVKIWFQNRRAXXK 736
V+ S GL R V++WFQNRRA K
Sbjct: 209 VREQLASETGLDMRVVQVWFQNRRAKEK 236
>U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform a protein.
Length = 122
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L L+E Q+K WFQNRR K+
Sbjct: 54 LNLTETQIKTWFQNRRTKWKK 74
>U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform b protein.
Length = 199
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKE 739
L L+E Q+K WFQNRR K+
Sbjct: 131 LNLTETQIKTWFQNRRTKWKK 151
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 653 VKRN*PSALGLSERQVKIWFQNRRAXXK 736
V+ S GL R V++WFQNRRA K
Sbjct: 209 VREQLASETGLDMRVVQVWFQNRRAKEK 236
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 571 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
K RV++S Q ELE+ F ++Y+T + +LA S+
Sbjct: 152 KRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSI 187
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQKT 754
L E +V+IWFQNRRA + ++T
Sbjct: 83 LHEERVQIWFQNRRAKYRREQKQT 106
>Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical
protein F26C11.2 protein.
Length = 252
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
L L E +V++WFQNRRA ++ Q
Sbjct: 125 LDLLESRVQVWFQNRRAKWRKREQ 148
>X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein.
Length = 184
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
L L E +V++WFQNRRA ++ Q
Sbjct: 89 LDLLESRVQVWFQNRRAKWRKREQ 112
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXK 736
+GL++ QVK W+QNRR K
Sbjct: 194 MGLTDTQVKTWYQNRRTKWK 213
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT*RGGDE 772
+ L+E +V++WFQNRRA ++ +K R DE
Sbjct: 186 IDLTEARVQVWFQNRRAKYRK-QEKIRRVKDE 216
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT*RGGDE 772
+ L+E +V++WFQNRRA ++ +K R DE
Sbjct: 186 IDLTEARVQVWFQNRRAKYRK-QEKIRRVKDE 216
>Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical
protein W05E10.3 protein.
Length = 439
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 656 KRN*PSALGLSERQVKIWFQNRRAXXKEASQK 751
K+ +A GL++ QV WF+NRR + A+ K
Sbjct: 215 KKELANATGLTQMQVGNWFKNRRQRDRAAAAK 246
>Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical
protein M142.4 protein.
Length = 247
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 571 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+YR +S Q LE+EF Y++ + + ELA L
Sbjct: 70 RYRTAFSREQIGRLEREFAKENYVSRKTRGELAAEL 105
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXK 736
L L E +K+WFQNRR K
Sbjct: 105 LNLPEGTIKVWFQNRRMKDK 124
>Z11794-1|CAA77837.1| 66|Caenorhabditis elegans ceh16-1 protein
protein.
Length = 66
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRR 724
L L+E Q+K WFQNRR
Sbjct: 51 LNLTETQIKTWFQNRR 66
>X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein.
Length = 263
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 571 KYRVVYSDHQRLELEKEFHYSRYITIRRKAELAVSL 678
+YR +S Q LE+EF Y++ + + ELA L
Sbjct: 86 RYRTAFSREQIGRLEREFAKENYVSRKTRGELAAEL 121
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXK 736
L L E +K+WFQNRR K
Sbjct: 121 LNLPEGTIKVWFQNRRMKDK 140
>U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein.
Length = 452
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRAXXKE 739
GLS R +++WFQN+R K+
Sbjct: 303 GLSARVIRVWFQNKRCKDKK 322
>AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein.
Length = 439
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 656 KRN*PSALGLSERQVKIWFQNRRAXXKEASQK 751
K+ +A GL++ QV WF+NRR + A+ K
Sbjct: 215 KKELANATGLTQMQVGNWFKNRRQRDRAAAAK 246
>AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain
family protein 7 protein.
Length = 452
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRAXXKE 739
GLS R +++WFQN+R K+
Sbjct: 303 GLSARVIRVWFQNKRCKDKK 322
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRAXXKEASQ 748
GL+ R +++WFQNRR+ + Q
Sbjct: 279 GLNMRVIQVWFQNRRSKERRMKQ 301
>Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical
protein R08B4.2 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQKT 754
L+E +V++WFQNRRA ++ + +
Sbjct: 156 LTEARVQVWFQNRRAKYRKQERSS 179
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 274 PATGEWTPDPHHFPKREPGEREIADMPSP 360
P++G W P P P R PG + MP P
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRAXXKEASQ 748
GL+ R +++WFQNRR+ + Q
Sbjct: 256 GLNMRVIQVWFQNRRSKERRMKQ 278
>U41553-6|AAO91696.1| 297|Caenorhabditis elegans Hypothetical
protein ZK1193.5c protein.
Length = 297
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXK 736
+S+ VKIWF+NRRA K
Sbjct: 264 ISQHNVKIWFKNRRAKCK 281
>U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical
protein ZK1193.5a protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXK 736
+S+ VKIWF+NRRA K
Sbjct: 435 ISQHNVKIWFKNRRAKCK 452
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 274 PATGEWTPDPHHFPKREPGEREIADMPSP 360
P++G W P P P R PG + MP P
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQKT*RGGDEGKGRSRFRCSTRNST 817
+GL +R V++WFQN RA KE +KT DE C + T
Sbjct: 1383 VGLHKRVVQVWFQNARA--KE--RKTRGAVDEDSRSGELHCEICDKT 1425
>AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical
protein ZK993.1 protein.
Length = 229
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQK 751
L E +V++WF+NRRA KE QK
Sbjct: 148 LKEERVEVWFKNRRA--KERKQK 168
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRA 727
GLS R +++WFQNRR+
Sbjct: 247 GLSMRVIQVWFQNRRS 262
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRA 727
GLS R +++WFQNRR+
Sbjct: 255 GLSMRVIQVWFQNRRS 270
>Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical
protein C07E3.6 protein.
Length = 327
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQK 751
L + ++K+WFQNRR K SQ+
Sbjct: 288 LSIDYHRLKVWFQNRRRKDKVRSQE 312
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
+G+++R V++WFQN RA + +++
Sbjct: 260 IGVNKRVVQVWFQNTRAKERRSNR 283
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRA 727
GLS R +++WFQNRR+
Sbjct: 247 GLSMRVIQVWFQNRRS 262
>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
protein R05D3.11 protein.
Length = 1327
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 40 RF*VCDNYVVRSVSRDRSGGVVCDGEC 120
RF D + SVSRD G CDG+C
Sbjct: 943 RFQYNDQVDISSVSRDFCSGCSCDGDC 969
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 680 GLSERQVKIWFQNRRA 727
GLS R +++WFQNRR+
Sbjct: 255 GLSMRVIQVWFQNRRS 270
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
+G+++R V++WFQN RA + +++
Sbjct: 260 IGVNKRVVQVWFQNTRAKERRSNR 283
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +2
Query: 677 LGLSERQVKIWFQNRRAXXKEASQ 748
+G+++R V++WFQN RA + +++
Sbjct: 260 IGVNKRVVQVWFQNTRAKERRSNR 283
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQKT*RGGDE 772
L E +V++WFQNRRA + ++ +G ++
Sbjct: 99 LPEVRVQVWFQNRRAKFRRQEKQDCQGEEK 128
>Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKE 739
L+E ++++WFQNRRA ++
Sbjct: 124 LNEARIQVWFQNRRAKHRK 142
>Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKE 739
L+E ++++WFQNRRA ++
Sbjct: 124 LNEARIQVWFQNRRAKHRK 142
>U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeobox
protein 10 protein.
Length = 344
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQKT 754
L E ++++WFQNRRA ++ ++KT
Sbjct: 175 LQEDRIQVWFQNRRAKWRK-TEKT 197
>U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein.
Length = 344
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 683 LSERQVKIWFQNRRAXXKEASQKT 754
L E ++++WFQNRRA ++ ++KT
Sbjct: 175 LQEDRIQVWFQNRRAKWRK-TEKT 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,648,976
Number of Sequences: 27780
Number of extensions: 350988
Number of successful extensions: 1487
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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