Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K08
         (943 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   3.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.7  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = +2

Query: 449 GALXXPGAPGVXXLXXGGGGGSXFXLXGXXXXPGAPGGGG 568
           G    PG PG   L    G      L G    PG PG  G
Sbjct: 163 GTNGVPGVPGAPGLAGRDGCNGTDGLPGLSGLPGNPGPRG 202



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +3

Query: 468 GPXGFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
           GP G+    G  G       +G R   GP GG G
Sbjct: 417 GPRGYEGPQGPKGMDGFDGEKGERGQMGPKGGQG 450


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 468 GPXGFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
           G  G     G GGG      RG R   G  GGGG
Sbjct: 65  GGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = +2

Query: 464 PGAPGVXXLXXGGGGGSXFXLXGXXXXPGAPGGGG 568
           PGA G      G GGG+     G    PG  GGGG
Sbjct: 200 PGAGG-----GGSGGGAPGGGGGSSGGPGPGGGGG 229


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = +2

Query: 449 GALXXPGAPGVXXLXXGGGGGSXFXLXGXXXXPGAPGGGG 568
           GA+  PG  GV  L    G      + G    PG  G  G
Sbjct: 485 GAIGRPGKVGVPGLSGEAGAKGEMGIQGLPGLPGPAGLNG 524



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = -2

Query: 555 GAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
           G PG    P     +  P P      PGAPG
Sbjct: 146 GTPGPPGYPGDVGPKGEPGPKGPAGHPGAPG 176


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect(2) = 3.7
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = -2

Query: 567 PPPPGAPGXXXXPXXXXXEPPP 502
           PPPP  PG           PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551



 Score = 20.6 bits (41), Expect(2) = 3.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 510 PPPPPXXRXXTPGAPG 463
           PPPPP     +P A G
Sbjct: 586 PPPPPMGPPPSPLAGG 601


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = +2

Query: 443 VLGALXXPGAPGVXXLXXGGGGGSXFXLXGXXXXPGAPGGGG 568
           V  A+    +PG      GGGGG      G        GGGG
Sbjct: 640 VAAAVAASVSPGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGG 681


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,883
Number of Sequences: 2352
Number of extensions: 5992
Number of successful extensions: 45
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)