Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_K08
(943 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.008
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.008
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.30
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.52
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 32 0.68
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.90
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.90
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 0.90
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.6
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.6
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 2.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.1
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 2.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 2.8
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.8
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 2.8
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 2.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.6
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 3.6
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.4
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 6.4
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.4
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 6.4
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 29 6.4
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.4
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 6.4
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 8.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.4
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 28 8.4
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 28 8.4
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 28 8.4
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 8.4
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 28 8.4
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 8.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP PG P PPPPP R PG G
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 332
Score = 34.7 bits (76), Expect = 0.097
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PP PG P PPPPP TPG PG
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG 312
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP + G P PPPPP PG PG
Sbjct: 287 PPPPPSSGMWPPP------PPPPPGRTPGPPGMPG 315
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 568 PPPPGGPXXXRXPRXXKXGTPPPAPXKXXNPXGPG 464
PPPP P G PPP P P G G
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXR 487
P PPP P P PPPPP R
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 342
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP PG P PPPPP R PG G
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG 342
Score = 34.7 bits (76), Expect = 0.097
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PP PG P PPPPP TPG PG
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG 322
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP + G P PPPPP PG PG
Sbjct: 297 PPPPPSSGMWPPP------PPPPPGRTPGPPGMPG 325
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 568 PPPPGGPXXXRXPRXXKXGTPPPAPXKXXNPXGPG 464
PPPP P G PPP P P G G
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXR 487
P PPP P P PPPPP R
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 352
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PGAPG P EP PP PG PG
Sbjct: 121 PGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPG 155
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -2
Query: 582 PXXTXPP-PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PP PPGAPG P PP PG PG
Sbjct: 145 PCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPG 185
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG PPP P PGAPG
Sbjct: 124 PGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPG 158
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -2
Query: 573 TXPP----PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
T PP PPG PG P E PP P G PG
Sbjct: 142 TPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPG 182
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P PPPP A G P PPPPP T P
Sbjct: 275 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPP 496
P P P T PPP G P PPPPP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP A G P PPPPP P A G
Sbjct: 255 PPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGG 287
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P + PPPP P P PPPPP P G
Sbjct: 233 PAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTG 270
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 568 PPPPGGPXXXRXPRXXKXGTPPPA 497
PPP G P P G+PPPA
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPA 324
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P PPPP A G P PPPPP T P
Sbjct: 296 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPP 496
P P P T PPP G P PPPPP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP A G P PPPPP P A G
Sbjct: 276 PPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGG 308
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P + PPPP P P PPPPP P G
Sbjct: 254 PAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTG 291
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 568 PPPPGGPXXXRXPRXXKXGTPPPA 497
PPP G P P G+PPPA
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPA 345
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P PPPP A G P PPPPP T P
Sbjct: 281 PPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPP 496
P P P T PPP G P PPPPP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP A G P PPPPP P A G
Sbjct: 261 PPPPPAAGSPPPPRTG--SPPPPPTGSPPPPPAGG 293
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P + PPPP P P PPPPP P G
Sbjct: 239 PAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTG 276
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 568 PPPPGGPXXXRXPRXXKXGTPPPA 497
PPP G P P G+PPPA
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPA 330
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPP 499
PPPPG PG P PPPP
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPP 729
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.9 bits (69), Expect = 0.68
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPP 496
P PPPP P P PPPPP
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPPP 78
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTP 475
P PPPP P P PPPPP R P
Sbjct: 61 PAQFCPPPPICP--PPPPPPMPCPPPPPPMPRPSCP 94
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 561 PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPG PG P PP PP R PG PG
Sbjct: 243 PPGPPGPPGPPTRRPPGPPGPPTRR--PPGPPG 273
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P PPPP P P PPPPP P P
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPP 496
P PPPP P P PPPPP
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P P P PPP P P PPPPP P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 561 PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPG PG P PP P PGAPG
Sbjct: 263 PPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPG 295
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -2
Query: 582 PXXTXPP-PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PP PPG G PP P R PG PG
Sbjct: 258 PGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPG 298
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = -2
Query: 660 GXPRXXXXXXXPXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXX 481
G P P P PPPP P P PPPPP
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 658
Query: 480 TPGAP 466
G P
Sbjct: 659 GAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = -2
Query: 660 GXPRXXXXXXXPXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXX 481
G P P P PPPP P P PPPPP
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 484
Query: 480 TPGAP 466
G P
Sbjct: 485 GAGGP 489
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P P P T PPP P P PPPPP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXE--PPPPPXXRXXTPGAP 466
P P P PPP G P P + PPPPP P AP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
PPPPG P P PPPPP G P
Sbjct: 714 PPPPGLP-----PITGGPPPPPPPGGLPPITGGP 742
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P P P T PPP P P PPPPP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXE--PPPPPXXRXXTPGAP 466
P P P PPP G P P + PPPPP P AP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
PPPPG P P PPPPP G P
Sbjct: 714 PPPPGLP-----PITGGPPPPPPPGGLPPITGGP 742
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P P P T PPP P P PPPPP P P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = -2
Query: 627 PXXXXPXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXE--PPPPPXXRXXTPGAP 466
P P P PPP G P P + PPPPP P AP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
PPPPG P P PPPPP G P
Sbjct: 297 PPPPGLP-----PITGGPPPPPPPGGLPPITGGP 325
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 122 PGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPG 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P P GAPG P PP P TPG G
Sbjct: 247 PGPKGAPGPDGPPGVDGQSGPPGPPGPAGTPGEKG 281
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 117 PGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPG 151
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P P GAPG P PP P TPG G
Sbjct: 242 PGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKG 276
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGAPG P + PP P PG PG
Sbjct: 176 PGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPG 207
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P + PP P PG PG
Sbjct: 168 PGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPG 202
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPG 154
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 594 AXXXPXXTXPP-PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
A P PP PPGAPG P EP P PG PG
Sbjct: 179 APGEPGPKGPPGPPGAPGAPGTPG----EPGVPAQSEPLIPGEPG 219
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 117 PGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPG 151
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P P GAPG P PP P TPG G
Sbjct: 242 PGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKG 276
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P + PP P PG PG
Sbjct: 168 PGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPG 202
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPG 154
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 594 AXXXPXXTXPP-PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
A P PP PPGAPG P EP P PG PG
Sbjct: 179 APGEPGPKGPPGPPGAPGAPGTPG----EPGVPAQSEPLIPGEPG 219
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 465 PGPXGFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
PGP G GA G P G GPPG G
Sbjct: 186 PGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAG 220
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEP--PPPPXXRXXTPGAPG 463
P P P PG P P PPPP R PGAPG
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMR-PPPGAPG 803
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEP--PPPPXXRXXTPGAPG 463
P P P PG P P PPPP R PGAPG
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMR-PPPGAPG 803
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P PPPPG G P PPPP P P
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPP 496
PPPP G P PPPPP
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPP 118
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPP 496
PPPP G P PPPPP
Sbjct: 96 PPPPMMGGIPPPPPMFGAPPPPPP 119
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 469 GPXGSXSXXGRGGGFXXXXXGXXGXSXGPRGGGXCXXXPSXG 594
G G S G GGG G G G GGG C S G
Sbjct: 137 GGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 469 GPXGSXSXXGRGGGFXXXXXGXXGXSXGPRGGGXCXXXPSXG 594
G G G GGG G G + P GGG C S G
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG 198
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 478 GSXSXXGRGGGFXXXXXGXXGXSXGPRGGGXCXXXPSXGXXXXXG 612
GS G GGG G G G GGG PS G G
Sbjct: 150 GSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +1
Query: 469 GPXGSXSXXGRGGGFXXXXXGXXGXSXGPRGGGXCXXXPSXG 594
G G S G GGG G G G GGG C S G
Sbjct: 137 GGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG 178
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 469 GPXGSXSXXGRGGGFXXXXXGXXGXSXGPRGGGXCXXXPSXG 594
G G G GGG G G + P GGG C S G
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSG 198
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 478 GSXSXXGRGGGFXXXXXGXXGXSXGPRGGGXCXXXPSXGXXXXXG 612
GS G GGG G G G GGG PS G G
Sbjct: 150 GSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGG 194
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 124 PGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPG 158
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEP--PPPPXXRXXTPGAPG 463
P P P PG P P PPPP R PGAPG
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMR-PPPGAPG 803
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEP--PPPPXXRXXTPGAPG 463
P P P PG P P PPPP R PGAPG
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMR-PPPGAPG 803
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 124 PGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPG 158
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 110 PGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPG 144
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 468 GPXGFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
GP G GA G P G GPPGG G
Sbjct: 181 GPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPG 214
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGAPG P + P P PGAPG
Sbjct: 171 PGAPGQDGQPGAPGNKGPSGPNGNPGAPGAPG 202
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGAPG P + P P PGAPG
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPG 202
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGAPG P + P P PGAPG
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPG 202
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 568 PPPPGGPXXXRXPRXXKXGTPPPAPXKXXNPXGP 467
PPPP P P + G PPP P P P
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP P PPPPP P PG
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGAPG P + P P PGAPG
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPG 202
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGAPG P + P P PGAPG
Sbjct: 171 PGAPGNDGQPGAPGNKGPSGPNGNPGAPGAPG 202
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 568 PPPPGGPXXXRXPRXXKXGTPPPAPXKXXNPXGP 467
PPPP P P + G PPP P P P
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPP P PPPPP P PG
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG PPP P + PG PG
Sbjct: 128 PGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPG 162
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PG PG P EP PP + G PG
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPG 154
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PPP A G P PPPP PGAPG
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGG----PGAPG 421
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPG 472
P PPPPG PG P PP PG
Sbjct: 430 PGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPG 466
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPP 496
PPPPG P P PPPPP
Sbjct: 470 PPPPGPPSSLL-PLINTNAPPPPP 492
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPP 496
PPPP PG PPPPP
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPPP 543
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPP 496
PPPP P P PPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPP 496
PPPP P P PPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 573 TXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
T PPPP P PPPPP P P
Sbjct: 66 TPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 568 PPPPGGPXXXRXPRXXKXGTPPPAPXKXXNPXGP 467
PPPP P P PPPAP P P
Sbjct: 92 PPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPP 125
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PG+PG P + P P PGAPG
Sbjct: 138 PGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPG 169
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PG+PG P + P P PGAPG
Sbjct: 171 PGSPGQDGQPGAPGNKGPSGPNGNPGAPGAPG 202
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 454 SXXSRGPXGSXSXXGRGGGFXXXXXGXXGXSXGPRGG 564
S S G + GRGGG G G S G RGG
Sbjct: 41 SDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGG 77
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/40 (47%), Positives = 20/40 (50%)
Frame = +2
Query: 449 GALXXPGAPGVXXLXXGGGGGSXFXLXGXXXXPGAPGGGG 568
GA PGAPGV GGG G+ G GAPGG G
Sbjct: 173 GAPGKPGAPGV-----GGGSGA----PGAPGPKGAPGGPG 203
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 464 PGAPGVXXLXXGGGGGSXFXLXGXXXXPGAPGGGG 568
PGAPG GGG G PG PG G
Sbjct: 172 PGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPG 206
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -2
Query: 582 PXXTXPP-PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PP P G PG P + PP P + G PG
Sbjct: 227 PGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPG 267
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -2
Query: 582 PXXTXPP-PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PP P G PG P + PP P + G PG
Sbjct: 227 PGPVGPPGPSGQPGNDGTPGQPGPKGPPGPDGKPGADGNPG 267
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 561 PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPG PG P PPP P TPG G
Sbjct: 259 PPGLPGQCGPPGPPGYTPPPGP---PGTPGVQG 288
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = -2
Query: 573 TXPPPP-GAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
T PPPP G P PPPPP P P
Sbjct: 42 TPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPP 78
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = -2
Query: 573 TXPPPP-GAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
T PPPP G P PPPPP P P
Sbjct: 105 TPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 141
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
PPP G P PPPPP P P
Sbjct: 139 PPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 172
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
PPP G P PPPPP P P
Sbjct: 170 PPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPP 203
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
PPP G P PPPPP P P
Sbjct: 232 PPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 265
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PPPPG PG P + P + PGAPG
Sbjct: 210 PPPPGPPG---PPGPPGNDGQPGAPGQDGQPGAPG 241
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = -2
Query: 612 PXXXXXAXXXPXXTXPPPPGAPGXXXXPXXXXXEPPP--PPXXRXXTPGAPG 463
P A P P PPG PG P + P P +PG PG
Sbjct: 201 PGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPG 252
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Frame = -2
Query: 582 PXXTXPP-PPGAPGXXXXPXXXXXEP--PPPPXXRXXTPGAPG 463
P PP PPG PG P PP P PG PG
Sbjct: 251 PGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPG 293
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGAPG P + P P PG+PG
Sbjct: 176 PGAPGSDGQPGAAGDKGPAGPNGNPGAPGSPG 207
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -2
Query: 582 PXXTXPP-PPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
P PP P G PG P P P PGAPG
Sbjct: 223 PGPAGPPGPQGPPGAPGQPGHDGQPGTPGPKGPNGNPGAPG 263
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGA G P PP P PGAPG
Sbjct: 124 PGADGDAGSPGEAGGAGPPGPPGPDGNPGAPG 155
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 558 PGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPG 463
PGA G P PP P PGAPG
Sbjct: 124 PGADGDAGSPGEAGGAGPPGPPGPDGNPGAPG 155
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -2
Query: 582 PXXTXPPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAP 466
P PPPP P P PPP P AP
Sbjct: 127 PYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAP 165
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 566 PPPRGPXXXPXXPXXXXXNPPPRPXXXXEPXGP 468
PPPR P P P PP P P P
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTP 187
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 477 GFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
G+ G GGG RG G PGGGG
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGG 248
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 477 GFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
G+ G GGG RG G PGGGG
Sbjct: 180 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGG 210
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 477 GFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
G+ G GGG RG G PGGGG
Sbjct: 180 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGG 210
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 477 GFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
G+ G GGG RG G PGGGG
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGG 248
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 477 GFXXXXGAGGGVPXXXXRGXRXXXGPPGGGG 569
G+ G GGG RG G PGGGG
Sbjct: 218 GYNGGGGGGGGWGGPAQRGGPGAYGGPGGGG 248
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 567 PPPPGAPGXXXXPXXXXXEPPPPPXXRXXTPGAPGXXRA 451
P P G PG P P P T GAPG A
Sbjct: 258 PSPAGTPGPPGPPGKDGEAGPDGPAGAPGTDGAPGPDAA 296
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 464 PGAPGVXXLXXGGGGGSXFXLXGXXXXPGAPGGGG 568
PG G+ GGGGG F G G GGG
Sbjct: 144 PGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGG 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,273,810
Number of Sequences: 27780
Number of extensions: 183274
Number of successful extensions: 3429
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2667
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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