Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K06
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0786 + 23139854-23139901,23140054-23140122,23140531-231405...    81   1e-15
01_06_0706 + 31352513-31352813,31352906-31353363                       33   0.30 
02_01_0450 + 3234378-3234834,3235118-3235223,3235722-3235920,323...    30   2.1  

>12_02_0786 +
           23139854-23139901,23140054-23140122,23140531-23140544,
           23140603-23140675,23140875-23140979,23141817-23142080,
           23142159-23142251,23142381-23142587,23143155-23143258,
           23143436-23143502,23143576-23143683,23143943-23144033,
           23144123-23144193,23144421-23144549,23144659-23144766
          Length = 516

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 46/151 (30%), Positives = 75/151 (49%)
 Frame = +1

Query: 322 GHLTCGITQKEYAERRETLISRLVSEAPNVHKTHIVVIPAARKQFMSDKIPYVFRQNSDF 501
           G +T GIT  EY  RR+ L+  L  ++       + +I +A +Q M+D +PY FRQN D+
Sbjct: 108 GEITPGITSDEYIFRRKKLLEVLPEKS-------LAIIASAEQQMMTDVVPYSFRQNGDY 160

Query: 502 FYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKDSHAELWEGPRTGCTAATQLFAVDEAR 681
            Y+TGC +P  + V+     S+     +F+ +      +W+G   G  AA   F  D+A 
Sbjct: 161 LYITGCAQPGGVAVL-----SEETGLCMFMPDTSKEDVVWQGQTAGVEAAENFFKADKAF 215

Query: 682 PVDSFSVYINKLAVSSKPSVLWYHNEAPANP 774
           P+      + ++   SK   + YHN    +P
Sbjct: 216 PLSEMQKILPEMIERSK---VVYHNVKTLSP 243


>01_06_0706 + 31352513-31352813,31352906-31353363
          Length = 252

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +3

Query: 135 RKVLPSLAVKHHKLLKSHIRNQLRCLSTIDHPPGAVERSTFSIPQGTFGQATC 293
           RK+  SL  +  +L  SH       L    H PG +E++      GTFG+  C
Sbjct: 108 RKIFDSLPAEEQRLWHSHAHEIKAGLWVSPHVPGMLEKAELEKMAGTFGKFWC 160


>02_01_0450 +
           3234378-3234834,3235118-3235223,3235722-3235920,
           3236119-3236187,3236299-3236373,3236484-3236582,
           3236694-3236864,3237394-3237519
          Length = 433

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = +1

Query: 274 PSAKQPVTPIRT*SNRGHLTCGITQKEY--AERRETLISRLVSEAPNVHKTHIVVIPAAR 447
           P+A    TP    +  G   CG  + E   A+ R  L S +VSE PNV  + +  +  A 
Sbjct: 75  PAAGDDATPPAAAAEEGKAKCGGGEDESDRAKLRAGLHSAIVSEKPNVRWSDVSGLDGA- 133

Query: 448 KQFMSDKI--PYVFRQNSDFFYLTGCLEP-SAILVMIKPAHSDTFKSVLFVHEKDS 606
           KQ + + +  P  F Q     + TG  +P  A L+   P    ++ +     E DS
Sbjct: 134 KQALQEAVVLPVEFPQ-----FFTGKRKPWKAFLLYGPPGTGKSYLAKAVATEADS 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,035,986
Number of Sequences: 37544
Number of extensions: 479651
Number of successful extensions: 1131
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)