Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K06
         (879 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          25   3.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   5.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.3  

>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +1

Query: 655 QLFAVDEARPVDSFSVYINKLAVSSKPSVLWYHNEAPANPEIHSTIRSVIRPETQVTL 828
           QL A+ ++R      + +  +A+      L Y+N  PA+  I      ++R   +VT+
Sbjct: 143 QLDALTDSRNALYIDLLLANIAIGETKQALSYYNLMPASMPIDKLHEQIVRFVYRVTI 200


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 165  HHKLLKSHIRNQLRCLSTIDH 227
            +H+  K HI+NQ + L  +DH
Sbjct: 1068 YHRKYKIHIQNQRQPLLDVDH 1088


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +1

Query: 493 SDFF--YLTGCLEPSAILVMIKPAHSDTFKS 579
           +DFF  YL  C++PS++L  +    S   KS
Sbjct: 734 TDFFHAYLGFCVDPSSLLSPLNHKRSSGIKS 764


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 921,845
Number of Sequences: 2352
Number of extensions: 18276
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)