Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K04
         (1291 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   8.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   8.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = -3

Query: 881 DGGXGXXDXX--GGAXGGRGXXXXGXGTQR 798
           +GG G  D    GG  GGRG    G G  R
Sbjct: 54  NGGYGGGDDGYGGGGRGGRGGRGGGRGRGR 83


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 22/81 (27%), Positives = 23/81 (28%), Gaps = 3/81 (3%)
 Frame = -3

Query: 899 GXGXXXDGGXGXXDXXGGAXGGRGXXXXG-XGTQRTXXXAPVL*AVGXXGXW--XXGYXX 729
           G G    GG G     GG   GR     G  G       A V    G  G      G   
Sbjct: 662 GGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMMSTGAGVNR 721

Query: 728 GAKXXKGTXXARVXXXGGRXG 666
           G     G+    V   GG  G
Sbjct: 722 GGDGGCGSIGGEVGSVGGGGG 742


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,597
Number of Sequences: 2352
Number of extensions: 4077
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 148375161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)