Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_K02
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0446 - 3147007-3147111,3147215-3147367,3147445-3147497,314...    31   1.1  
08_02_1356 - 26348953-26350062                                         31   1.5  
04_03_0624 - 18115559-18115725,18115993-18116872                       29   6.1  
03_01_0564 - 4176177-4178096                                           29   6.1  
12_02_0674 - 21745321-21746223,21746229-21747608                       28   8.1  
02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003...    28   8.1  
01_01_0471 - 3467275-3467351,3467526-3467895,3468258-3468555,346...    28   8.1  

>06_01_0446 -
           3147007-3147111,3147215-3147367,3147445-3147497,
           3147670-3147988,3148754-3148892,3149141-3149222,
           3149711-3149789,3150135-3150314,3150811-3151070,
           3151192-3151294,3151469-3151609,3151797-3151870,
           3153536-3153635,3154108-3154167,3154381-3154428,
           3154519-3154610,3155023-3155071,3155810-3155879,
           3156408-3156505,3157288-3157347
          Length = 754

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3

Query: 744 GNLSIGAVLLGAGFVTSVEIDADALEVFQEN 836
           G LS+ + LL A  V  ++ID  +LE+ QEN
Sbjct: 41  GTLSVASSLLDAEHVVGIDIDPQSLELAQEN 71


>08_02_1356 - 26348953-26350062
          Length = 369

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +2

Query: 323 AALSQPNPVSQLPMCSIPPVSATAGFPQLPEANVINTSHRAALQHANATSCGYFVSQDSS 502
           AAL  P   +QLP+ +  P     G P+      +    R A     ++  G +  +D++
Sbjct: 118 AALPVPRREAQLPLLAFDPADGGGGSPRYHVVCFVAWQERGATVDVFSSETGAWAERDAA 177

Query: 503 FG 508
           FG
Sbjct: 178 FG 179


>04_03_0624 - 18115559-18115725,18115993-18116872
          Length = 348

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = -3

Query: 457 VLECSSMTSIYHI-CFRKLRKTSCCRNWWDGTHRKLTDGIWLTQGCC 320
           V+ C ++  I ++     L  T C    W G +  L DG     GCC
Sbjct: 123 VIGCRTLAYIDNLDTAGNLTTTGCVATCWQGNYSSLNDGDCFGIGCC 169


>03_01_0564 - 4176177-4178096
          Length = 639

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +3

Query: 744 GNLSIGAVLLGAGFVTSVEIDADALEVFQENIQ 842
           G++ + +VL GA FVT V + A +L V ++N+Q
Sbjct: 198 GDVGLNSVLGGAVFVTCVVVGAVSLCVAEKNVQ 230


>12_02_0674 - 21745321-21746223,21746229-21747608
          Length = 760

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +1

Query: 310 CSVNSSPESAKSRQSTSYVFHPTSFGNSWFSSTS 411
           C V+S   + K   STS  F PTSF N   +STS
Sbjct: 698 CKVSSPTGACKFSTSTS-TFTPTSFSNDLTASTS 730


>02_05_0046 -
           25398412-25398594,25399022-25399060,25399896-25400360,
           25400758-25400816,25400920-25401748,25402554-25402898,
           25402973-25403435,25403537-25403640,25403692-25403901,
           25404933-25405088,25405774-25406052,25406237-25406986,
           25407141-25407232,25407977-25408361,25408672-25408752,
           25409196-25409354,25409399-25409506,25409604-25409666,
           25409764-25409835,25409932-25410366
          Length = 1758

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +2

Query: 317 LTAALSQPNPVSQLPMCSIPPVSATAGFPQLPEANVINTSHRAALQH--ANATSCGYFVS 490
           LTA L++P+  S  P CS+P VS    +  L    V+ T  R  LQ    NA+  G    
Sbjct: 790 LTAGLAEPS--SAFPGCSVPEVSHPRSWSSL---RVMTTEQRLELQQRIMNASENGKLPF 844

Query: 491 QD 496
           +D
Sbjct: 845 RD 846


>01_01_0471 -
           3467275-3467351,3467526-3467895,3468258-3468555,
           3468680-3469734,3469823-3470467
          Length = 814

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -3

Query: 676 QSNCSNMSGCLVLLKFNFW 620
           QS+ SN++GCL+LL+F  W
Sbjct: 416 QSDGSNLTGCLLLLQFWSW 434


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,147,633
Number of Sequences: 37544
Number of extensions: 420331
Number of successful extensions: 1094
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)